Strain Fitness in Agrobacterium fabrum C58 around Atu3327
Experiment: Bethi_Library_OD0.01
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bethi_Library_OD0.01 |
---|---|---|---|---|---|
remove | |||||
361,179 | - | Atu3327 | 0.12 | -1.1 | |
361,357 | - | Atu3327 | 0.38 | -0.8 | |
361,414 | - | Atu3327 | 0.47 | -1.1 | |
361,664 | - | Atu3327 | 0.83 | -0.3 | |
361,811 | + | -1.1 | |||
361,906 | - | +0.3 | |||
361,999 | + | -0.5 | |||
362,055 | + | +0.1 | |||
362,370 | + | -0.6 | |||
362,423 | + | +0.4 | |||
362,678 | + | Atu3328 | 0.51 | +1.1 | |
362,715 | - | Atu3328 | 0.58 | -1.2 | |
362,715 | - | Atu3328 | 0.58 | -1.2 | |
362,725 | - | Atu3328 | 0.60 | +0.2 | |
362,725 | - | Atu3328 | 0.60 | -1.2 | |
362,725 | - | Atu3328 | 0.60 | -0.4 |
Or see this region's nucleotide sequence