Strain Fitness in Agrobacterium fabrum C58 around Atu2522

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
2,491,659	-		Atu2521	0.62	-0.9
2,491,722	-		Atu2521	0.64	-2.3
2,491,722	-		Atu2521	0.64	+0.4
2,491,788	+		Atu2521	0.67	-1.9
2,491,788	+		Atu2521	0.67	-1.3
2,491,788	+		Atu2521	0.67	+0.3
2,491,788	+		Atu2521	0.67	-2.1
2,491,788	+		Atu2521	0.67	-1.6
2,491,788	+		Atu2521	0.67	-2.2
2,491,788	+		Atu2521	0.67	-2.8
2,491,796	-		Atu2521	0.67	-2.3
2,491,796	-		Atu2521	0.67	-1.2
2,491,981	+		Atu2521	0.74	-2.4
2,492,044	+		Atu2521	0.77	-0.9
2,492,076	-		Atu2521	0.78	-1.4
2,492,076	-		Atu2521	0.78	-0.2
2,492,112	+		Atu2521	0.79	-0.6
2,492,123	+		Atu2521	0.80	-1.6
2,492,147	+		Atu2521	0.81	-1.4
2,492,147	+		Atu2521	0.81	-2.9
2,492,147	+		Atu2521	0.81	-2.0
2,492,297	+		Atu2521	0.86	-1.2
2,492,445	+				-0.9
2,492,453	-				-0.0
2,492,562	+				+1.2
2,492,567	-				-0.8
2,492,592	-				-1.8
2,492,615	-				-1.6
2,492,615	-				+1.4
2,492,636	+				-1.2
2,492,671	+				-6.2
2,492,687	+				-2.7
2,492,695	+				-5.5
2,492,754	-				-1.6
2,492,796	-		Atu2522	0.11	-2.2
2,492,796	-		Atu2522	0.11	-3.6
2,492,823	+		Atu2522	0.13	-5.0
2,492,826	-		Atu2522	0.13	+0.4
2,492,842	-		Atu2522	0.14	-1.2
2,492,975	+		Atu2522	0.24	-5.7
2,493,042	+		Atu2522	0.29	-4.9
2,493,149	-		Atu2522	0.37	-1.8
2,493,165	-		Atu2522	0.38	-4.7
2,493,200	+		Atu2522	0.40	-5.9
2,493,262	+		Atu2522	0.45	-4.7
2,493,329	+		Atu2522	0.50	-4.2
2,493,334	+		Atu2522	0.50	-4.8
2,493,334	+		Atu2522	0.50	-5.3
2,493,335	+		Atu2522	0.50	-5.4
2,493,343	-		Atu2522	0.51	-2.3
2,493,344	-		Atu2522	0.51	+0.4
2,493,363	+		Atu2522	0.52	-4.9
2,493,365	+		Atu2522	0.53	-2.5
2,493,365	+		Atu2522	0.53	-2.6
2,493,373	-		Atu2522	0.53	-3.3
2,493,378	-		Atu2522	0.53	-4.7
2,493,402	+		Atu2522	0.55	-0.6
2,493,412	+		Atu2522	0.56	-2.6
2,493,490	-		Atu2522	0.62	-2.1
2,493,622	+		Atu2522	0.71	-1.1
2,493,721	+		Atu2522	0.78	-3.7
2,493,775	-		Atu2522	0.82	-2.9
2,493,785	-		Atu2522	0.83	-1.4
2,493,799	-		Atu2522	0.84	-6.0
2,493,845	-		Atu2522	0.88	-4.9
2,494,041	+				+0.7
2,494,049	-				+1.2
2,494,049	-				-0.9
2,494,049	-				-0.4
2,494,049	-				-0.9