Strain Fitness in Agrobacterium fabrum C58 around Atu2471

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
2,438,426	+		Atu2469	0.65	+1.9
2,438,434	-		Atu2469	0.66	-0.5
2,438,490	-		Atu2469	0.72	-0.5
2,438,526	+		Atu2469	0.76	-0.0
2,438,534	-		Atu2469	0.77	-2.1
2,438,584	-		Atu2469	0.82	-1.6
2,438,584	-		Atu2469	0.82	+0.0
2,438,651	-		Atu2469	0.89	-0.2
2,438,726	+				+0.5
2,438,790	+				-0.1
2,438,804	+		Atu2470	0.11	-0.2
2,438,864	+		Atu2470	0.23	+0.6
2,438,906	-		Atu2470	0.32	+0.1
2,438,911	+		Atu2470	0.33	+0.3
2,438,911	+		Atu2470	0.33	+0.5
2,438,933	-		Atu2470	0.37	+0.3
2,439,063	-		Atu2470	0.63	-1.2
2,439,086	+		Atu2470	0.68	-0.8
2,439,166	-		Atu2470	0.84	+0.0
2,439,325	-				+0.2
2,439,379	+				-0.2
2,439,379	+				-0.0
2,439,379	+				+1.1
2,439,379	+				+0.7
2,439,379	+				+1.7
2,439,379	+				+0.1
2,439,387	-				+0.1
2,439,387	-				-0.5
2,439,387	-				+0.3
2,439,387	-				+0.9
2,439,387	-				+0.1
2,439,387	-				+0.2
2,439,387	-				-0.5
2,439,387	-				+0.4
2,439,432	+				-0.2
2,439,435	-				-0.6
2,439,477	-				-0.7
2,439,551	+		Atu2471	0.13	+0.2
2,439,559	-		Atu2471	0.14	-1.7
2,439,738	-		Atu2471	0.25	+0.3
2,439,808	-		Atu2471	0.30	+1.0
2,439,864	-		Atu2471	0.34	+0.3
2,439,885	-		Atu2471	0.35	+0.5
2,440,033	-		Atu2471	0.45	-1.0
2,440,033	-		Atu2471	0.45	-0.2
2,440,068	+		Atu2471	0.47	+0.8
2,440,076	-		Atu2471	0.48	+0.1
2,440,076	-		Atu2471	0.48	+0.2
2,440,086	-		Atu2471	0.48	+0.2
2,440,099	+		Atu2471	0.49	+1.2
2,440,099	+		Atu2471	0.49	-0.2
2,440,105	+		Atu2471	0.50	+1.1
2,440,107	-		Atu2471	0.50	+0.3
2,440,187	-		Atu2471	0.55	+0.9
2,440,267	-		Atu2471	0.60	-0.4
2,440,289	+		Atu2471	0.62	+0.0
2,440,349	-		Atu2471	0.66	+1.2
2,440,357	+		Atu2471	0.66	+0.4
2,440,669	+		Atu2471	0.87	-0.1
2,440,762	+				+0.0
2,440,770	-				-0.3
2,440,865	-				-0.0
2,441,093	-		Atu2472	0.47	-0.5
2,441,098	-		Atu2472	0.49	+0.6
2,441,282	+				+0.9
2,441,282	+				+0.2
2,441,290	-				+0.3
2,441,310	+				-1.2
2,441,313	-				-0.2
2,441,338	-				-0.3
2,441,338	-				+0.6
2,441,511	+				-0.2
2,441,513	-				-0.1
2,441,553	+		Atu2473	0.10	+0.0
2,441,563	+		Atu2473	0.11	+0.0
2,441,596	+		Atu2473	0.15	-0.0
2,441,643	+		Atu2473	0.20	-0.0
2,441,651	-		Atu2473	0.20	-0.5
2,441,675	-		Atu2473	0.23	+0.7
2,441,675	-		Atu2473	0.23	-0.3
2,441,731	+		Atu2473	0.29	+0.1
2,441,749	-		Atu2473	0.31	+0.4