Strain Fitness in Agrobacterium fabrum C58 around Atu1478

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
1,470,014	+		Atu1476	0.73	+0.2
1,470,062	+		Atu1476	0.79	+0.5
1,470,220	-				-0.3
1,470,305	+				+0.2
1,470,305	+				+0.3
1,470,349	+		Atu1477	0.12	-0.2
1,470,393	-		Atu1477	0.18	-1.5
1,470,413	-		Atu1477	0.21	+0.4
1,470,482	+		Atu1477	0.31	-1.9
1,470,518	+		Atu1477	0.37	-0.6
1,470,531	-		Atu1477	0.38	+1.0
1,470,533	+		Atu1477	0.39	-0.4
1,470,649	+		Atu1477	0.56	+0.1
1,470,708	-		Atu1477	0.64	-0.6
1,470,728	-		Atu1477	0.67	+0.0
1,470,846	-		Atu1477	0.84	+0.1
1,470,958	-				+0.5
1,471,035	-		Atu1478	0.13	+0.2
1,471,050	+		Atu1478	0.17	+0.5
1,471,050	+		Atu1478	0.17	-1.0
1,471,159	+		Atu1478	0.43	-0.8
1,471,173	+		Atu1478	0.47	+1.1
1,471,178	+		Atu1478	0.48	+0.1
1,471,244	+		Atu1478	0.64	+0.3
1,471,341	+		Atu1478	0.88	+0.9
1,471,354	-				-0.3
1,471,354	-				+0.6
1,471,474	+				+0.1
1,471,597	+				-0.3
1,471,625	+				-0.3
1,471,639	-				-0.8
1,471,821	-		Atu8157	0.48	+0.3
1,471,874	+		Atu8157	0.60	+1.3
1,471,882	-		Atu8157	0.62	+0.4
1,471,896	+		Atu8157	0.65	-0.2
1,471,911	+		Atu8157	0.68	+0.6
1,471,973	+		Atu8157	0.82	+0.1
1,472,006	+		Atu8157	0.89	-0.2
1,472,071	+				+0.7
1,472,271	-		Atu1480	0.25	+0.1
1,472,327	+		Atu1480	0.33	+0.8