Strain Fitness in Agrobacterium fabrum C58 around Atu1842

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
1,824,032	+				-0.3
1,824,036	-				-0.2
1,824,049	+				+0.8
1,824,049	+				-0.8
1,824,049	+				-0.4
1,824,120	+				+0.0
1,824,153	-				+0.1
1,824,190	+		Atu1842	0.15	+0.5
1,824,234	-		Atu1842	0.23	-1.0
1,824,234	-		Atu1842	0.23	-0.0
1,824,240	+		Atu1842	0.24	+0.3
1,824,271	-		Atu1842	0.30	+0.9
1,824,507	+		Atu1842	0.71	+0.2
1,824,550	-		Atu1842	0.79	+0.2
1,824,561	-		Atu1842	0.81	+1.0
1,824,567	+		Atu1842	0.82	-0.1
1,824,577	+		Atu1842	0.84	-0.0
1,824,577	+		Atu1842	0.84	+0.3
1,824,664	-				+0.8
1,824,697	+				-0.7
1,824,697	+				-0.3
1,825,039	+		Atu1843	0.23	-2.3
1,825,418	-		Atu1843	0.73	-1.0
1,825,607	+				-0.7