Strain Fitness in Agrobacterium fabrum C58 around Atu4649

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
1,801,824	-		Atu4648	0.35	-0.2
1,802,028	+		Atu4648	0.48	-0.8
1,802,213	+		Atu4648	0.61	-0.6
1,802,306	+		Atu4648	0.67	+0.5
1,802,316	+		Atu4648	0.67	+0.7
1,802,422	+		Atu4648	0.74	+0.1
1,802,441	+		Atu4648	0.76	-0.0
1,802,519	-		Atu4648	0.81	+0.2
1,802,666	+				-1.4
1,802,673	+				-0.0
1,802,681	-				+0.5
1,802,704	-				+0.9
1,802,722	+				+0.1
1,802,722	+				-0.0
1,802,730	-				+1.1
1,802,762	+				+0.8
1,802,771	-				+0.6
1,802,771	-				+0.8
1,802,812	+				-0.3
1,802,876	-				+0.1
1,802,894	+				+0.3
1,802,964	-		Atu4649	0.16	-1.0
1,803,010	-		Atu4649	0.21	-0.4
1,803,026	+		Atu4649	0.23	-1.8
1,803,033	+		Atu4649	0.23	-1.5
1,803,033	+		Atu4649	0.23	-0.8
1,803,041	-		Atu4649	0.24	-0.0
1,803,061	-		Atu4649	0.27	-0.5
1,803,108	+		Atu4649	0.32	-0.7
1,803,184	-		Atu4649	0.40	+0.7
1,803,184	-		Atu4649	0.40	-0.2
1,803,184	-		Atu4649	0.40	-1.0
1,803,194	-		Atu4649	0.41	-0.4
1,803,199	+		Atu4649	0.42	+0.4
1,803,207	-		Atu4649	0.43	-0.7
1,803,347	+		Atu4649	0.59	+0.1
1,803,361	-		Atu4649	0.60	+0.8
1,803,391	+		Atu4649	0.63	-0.5
1,803,454	+		Atu4649	0.70	+1.0
1,803,460	+		Atu4649	0.71	+1.5
1,803,512	+		Atu4649	0.77	-0.3
1,803,512	+		Atu4649	0.77	-0.0
1,803,520	-		Atu4649	0.78	-1.1
1,803,626	-		Atu4649	0.90	-0.3
1,803,681	-				+0.1
1,803,731	-				-0.6
1,803,856	+		Atu4650	0.14	-0.6
1,803,919	+		Atu4650	0.20	+0.2
1,803,972	+		Atu4650	0.25	+0.8
1,804,095	-		Atu4650	0.37	+1.5
1,804,251	+		Atu4650	0.52	-0.7
1,804,310	+		Atu4650	0.57	-0.6
1,804,358	-		Atu4650	0.62	-0.9
1,804,382	+		Atu4650	0.64	-0.0
1,804,543	-		Atu4650	0.80	+0.2
1,804,685	+				+1.0
1,804,685	+				+0.3
1,804,686	+				-1.2
1,804,692	+				-0.0
1,804,693	-				-1.0
1,804,693	-				-0.0
1,804,694	-				-0.2
1,804,694	-				+0.5