Strain Fitness in Agrobacterium fabrum C58 around Atu2419

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
2,390,900	+		Atu2418	0.71	-0.2
2,390,908	-		Atu2418	0.71	-1.2
2,390,927	+		Atu2418	0.72	-0.3
2,390,930	-		Atu2418	0.72	-0.3
2,390,981	+		Atu2418	0.73	-1.4
2,391,012	-		Atu2418	0.74	+0.9
2,391,034	-		Atu2418	0.75	-0.3
2,391,082	+		Atu2418	0.76	+0.4
2,391,160	-		Atu2418	0.78	-0.9
2,391,257	-		Atu2418	0.81	-0.0
2,391,257	-		Atu2418	0.81	-0.8
2,391,336	-		Atu2418	0.84	-0.6
2,391,354	+		Atu2418	0.84	+1.5
2,391,372	-		Atu2418	0.85	-0.8
2,391,455	+		Atu2418	0.87	-0.1
2,391,465	+		Atu2418	0.87	+0.5
2,391,470	-		Atu2418	0.88	-0.5
2,391,542	+		Atu2418	0.90	-0.1
2,391,630	+				+0.6
2,391,630	+				-0.1
2,391,630	+				-1.1
2,391,672	+				+1.1
2,391,700	-				+1.1
2,391,736	+				+0.4
2,391,751	-				+1.5
2,391,813	-				+0.2
2,391,825	-				-0.2
2,391,950	-				-0.2
2,392,030	-		Atu2419	0.15	+0.5
2,392,030	-		Atu2419	0.15	+0.6
2,392,030	-		Atu2419	0.15	+0.3
2,392,053	+		Atu2419	0.18	+0.9
2,392,055	-		Atu2419	0.18	+0.8
2,392,080	-		Atu2419	0.21	-1.6
2,392,090	-		Atu2419	0.22	+0.9
2,392,090	-		Atu2419	0.22	+1.0
2,392,104	+		Atu2419	0.23	+0.3
2,392,178	-		Atu2419	0.31	+0.3
2,392,328	-		Atu2419	0.47	+0.3
2,392,342	+		Atu2419	0.49	+0.1
2,392,362	+		Atu2419	0.51	+0.5
2,392,363	-		Atu2419	0.51	+1.8
2,392,370	-		Atu2419	0.52	+1.2
2,392,376	-		Atu2419	0.53	+0.6
2,392,395	-		Atu2419	0.55	+0.0
2,392,431	+		Atu2419	0.58	-0.9
2,392,654	+		Atu2419	0.82	-0.2
2,392,669	+		Atu2419	0.84	+0.2
2,392,930	-				+0.2
2,393,015	-				+0.5
2,393,039	+				+0.1
2,393,071	-				+0.3
2,393,188	+		Atu2420	0.17	-0.3
2,393,192	+		Atu2420	0.18	-0.7
2,393,253	-		Atu2420	0.29	+0.1
2,393,321	-		Atu2420	0.42	-0.5
2,393,452	-		Atu2420	0.67	-0.1
2,393,564	-		Atu2420	0.89	+0.7
2,393,600	-				-0.5
2,393,612	+				+0.9
2,393,637	+				-0.8
2,393,637	+				+0.7
2,393,738	+		Atu2421	0.13	-0.5