Strain Fitness in Agrobacterium fabrum C58 around Atu1093

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
1,082,841	-				+0.0
1,082,858	+				+0.7
1,082,858	+				-0.2
1,082,866	-				-1.8
1,082,868	+				+0.8
1,082,946	+		Atu1093	0.17	+0.2
1,082,946	+		Atu1093	0.17	+0.1
1,082,946	+		Atu1093	0.17	-0.0
1,082,946	+		Atu1093	0.17	+0.4
1,082,946	+		Atu1093	0.17	+0.6
1,082,954	-		Atu1093	0.18	+0.7
1,082,954	-		Atu1093	0.18	+0.3
1,082,954	-		Atu1093	0.18	+0.6
1,082,954	-		Atu1093	0.18	-0.3
1,082,954	-		Atu1093	0.18	-0.0
1,082,970	+		Atu1093	0.19	+0.1
1,082,989	-		Atu1093	0.21	+1.0
1,083,128	-		Atu1093	0.34	-0.9
1,083,167	-		Atu1093	0.38	+0.0
1,083,180	+		Atu1093	0.39	-1.2
1,083,188	-		Atu1093	0.40	-0.3
1,083,188	-		Atu1093	0.40	-0.5
1,083,190	+		Atu1093	0.40	-0.3
1,083,226	-		Atu1093	0.44	+1.2
1,083,262	-		Atu1093	0.47	+0.7
1,083,307	-		Atu1093	0.51	+0.1
1,083,374	-		Atu1093	0.58	+0.4
1,083,436	-		Atu1093	0.64	+0.2
1,083,438	+		Atu1093	0.64	+2.0
1,083,452	+		Atu1093	0.65	+0.4
1,083,460	-		Atu1093	0.66	+3.0
1,083,534	+		Atu1093	0.73	-0.6
1,083,602	+		Atu1093	0.80	+1.5
1,083,610	-		Atu1093	0.80	+1.4
1,083,612	-		Atu1093	0.81	-0.3
1,083,653	+		Atu1093	0.85	+1.2
1,083,661	-		Atu1093	0.85	+0.2
1,083,668	-		Atu1093	0.86	+0.7
1,083,688	+		Atu1093	0.88	+0.2
1,083,706	-		Atu1093	0.90	-0.5
1,083,740	-				-0.2
1,083,743	+				+0.1
1,083,766	+				-0.2
1,083,774	-				-0.2
1,083,778	+				-1.4
1,083,793	+				+0.4
1,083,849	+				+0.2
1,083,997	+				-0.4