Strain Fitness in Agrobacterium fabrum C58 around Atu3013

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
7,945	-				-0.5
7,969	-				-0.2
7,993	+				-1.0
7,993	+				-1.3
8,001	-				-0.2
8,001	-				-0.4
8,001	-				-0.2
8,046	-				+0.3
8,046	-				-1.3
8,055	+				-0.3
8,069	+				-1.2
8,077	-				-0.4
8,161	+				-1.0
8,251	-		Atu3012	0.23	-0.4
8,268	+		Atu3012	0.25	-0.2
8,465	-		Atu3012	0.54	+0.8
8,682	+		Atu3012	0.85	+0.4
8,730	+				-1.2
8,769	-				-0.8
9,018	+		Atu3013	0.19	+0.2
9,102	+		Atu3013	0.40	-0.6
9,125	-		Atu3013	0.46	-0.5
9,147	+		Atu3013	0.51	+0.2
9,195	+		Atu3013	0.63	-1.1
9,258	-		Atu3013	0.79	-0.6
9,331	-				-0.8
9,363	+				-0.5
9,457	-		Atu3014	0.44	-2.4
9,509	-		Atu3014	0.64	-0.4
9,695	-				-0.7
9,732	+				-0.8
9,768	-				+0.1
9,927	+				-0.6
9,959	-				-0.3
10,079	+		Atu3015	0.15	-0.8
10,090	+		Atu3015	0.17	-0.6
10,101	+		Atu3015	0.19	-0.8
10,130	-		Atu3015	0.24	+0.3
10,135	-		Atu3015	0.25	-1.8
10,296	+		Atu3015	0.54	+0.4
10,318	+		Atu3015	0.58	-0.2
10,323	+		Atu3015	0.59	+0.8
10,326	-		Atu3015	0.59	-0.2