Strain Fitness in Pseudomonas simiae WCS417 around PS417_04945

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,101,755	-		PS417_04940	0.78	-1.7
1,101,755	-		PS417_04940	0.78	-0.4
1,101,772	+		PS417_04940	0.78	+1.1
1,102,323	+				-1.6
1,102,467	-				-0.1
1,102,553	+		PS417_04945	0.18	+0.1
1,102,554	-		PS417_04945	0.18	-0.2
1,102,618	+		PS417_04945	0.27	-1.0
1,102,622	+		PS417_04945	0.28	-2.8
1,102,623	-		PS417_04945	0.28	-0.6
1,102,741	+		PS417_04945	0.44	-3.8
1,103,162	-				+1.4
1,103,162	-				-2.9
1,103,397	+		PS417_04950	0.27	+2.8
1,103,398	-		PS417_04950	0.28	-0.8
1,103,545	-		PS417_04950	0.51	-0.8
1,103,545	-				+1.4
1,103,550	+		PS417_04950	0.52	+0.5
1,103,551	-		PS417_04950	0.52	-0.0
1,103,551	-		PS417_04950	0.52	+0.3
1,103,551	-		PS417_04950	0.52	-2.2
1,103,551	-		PS417_04950	0.52	+0.2
1,103,551	-		PS417_04950	0.52	+0.2
1,103,627	-				+3.4
1,103,661	+		PS417_04950	0.70	-0.9
1,103,661	+		PS417_04950	0.70	+0.1
1,103,661	+		PS417_04950	0.70	+0.8
1,103,662	-		PS417_04950	0.70	+2.8
1,103,662	-		PS417_04950	0.70	-2.6
1,103,729	+		PS417_04950	0.80	+0.2
1,103,839	+				-1.4
1,103,861	+				+1.1
1,103,911	+				+1.1
1,103,912	-				-0.1
1,104,086	+		PS417_04955	0.29	+0.4
1,104,086	+		PS417_04955	0.29	+0.1
1,104,086	+		PS417_04955	0.29	-1.4
1,104,087	-		PS417_04955	0.29	-0.9
1,104,087	-		PS417_04955	0.29	+4.2
1,104,137	+		PS417_04955	0.37	+0.9
1,104,137	+		PS417_04955	0.37	-2.2
1,104,137	+		PS417_04955	0.37	-2.4
1,104,138	-		PS417_04955	0.38	+0.3
1,104,138	-		PS417_04955	0.38	-0.9