Strain Fitness in Pseudomonas simiae WCS417 around PS417_04330

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
968,432	+		PS417_04320	0.40	+0.7
968,432	+				+2.4
968,432	+		PS417_04320	0.40	-0.7
968,433	-		PS417_04320	0.41	+0.8
968,454	+		PS417_04320	0.43	-1.8
968,534	+		PS417_04320	0.52	+0.8
968,961	+				+0.6
968,979	-				+1.4
968,979	-				+0.0
969,042	+				-1.5
969,042	+				-1.3
969,043	-				+0.6
969,071	+				+1.2
969,071	+				+0.8
969,072	-				-2.1
969,072	-				+0.9
969,075	+				+0.6
969,075	+				-0.8
969,075	+				+0.7
969,076	-				-0.1
969,346	+				+0.6
970,771	-		PS417_04340	0.31	-0.6
970,771	-		PS417_04340	0.31	-2.2
970,771	-		PS417_04340	0.31	-0.2
970,771	-		PS417_04340	0.31	-2.2
970,771	-		PS417_04340	0.31	-0.9
970,771	-		PS417_04340	0.31	-1.9
970,771	-		PS417_04340	0.31	-1.1
970,771	-		PS417_04340	0.31	-2.6
970,771	-		PS417_04340	0.31	-0.9
970,771	-		PS417_04340	0.31	-1.6
970,927	-		PS417_04340	0.82	+2.0
970,953	-				-0.4
970,953	-				-0.7
970,953	-				-1.0
970,982	-				-0.2
970,982	-				-0.8
971,021	-				-1.5
971,027	-				+1.4