Strain Fitness in Pseudomonas simiae WCS417 around PS417_00295

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
57,333	-		PS417_00290	0.59	-0.3
57,471	+		PS417_00290	0.68	-0.1
57,542	+		PS417_00290	0.73	-2.8
57,543	-		PS417_00290	0.73	+0.1
57,543	-		PS417_00290	0.73	-0.8
57,543	-		PS417_00290	0.73	+0.4
57,547	-		PS417_00290	0.73	-0.3
57,595	+		PS417_00290	0.76	-0.4
57,595	+		PS417_00290	0.76	-0.5
57,802	-		PS417_00290	0.90	+0.7
57,802	-		PS417_00290	0.90	-0.0
57,934	+				-0.1
57,934	+				+0.1
57,935	-				-0.1
58,077	-				-1.2
58,080	-				-0.5
58,080	-				-0.9
58,256	+		PS417_00295	0.25	-0.7
58,364	-		PS417_00295	0.42	-1.9
58,365	+		PS417_00295	0.42	-0.4
58,365	+		PS417_00295	0.42	-1.9
58,366	-		PS417_00295	0.42	-1.5
58,366	-		PS417_00295	0.42	-1.6
58,404	+		PS417_00295	0.48	-2.2
58,405	-		PS417_00295	0.48	-1.2
58,405	-		PS417_00295	0.48	-0.7
58,573	-		PS417_00295	0.74	-1.1
58,761	+				-1.3
58,762	-				-0.0
58,783	+				+0.4
58,784	-				-2.5
58,784	-				-2.4
58,792	+				-0.3
58,794	+				+1.2
58,794	+				-2.4
58,794	+				+0.2
58,794	+				-2.8
58,875	+				-0.1
58,962	+				+0.4
58,985	-				+0.3
59,030	+				-0.8
59,031	-				-0.5
59,038	-				+0.5
59,187	-				+0.6
59,439	+		PS417_00300	0.30	+0.3
59,439	+		PS417_00300	0.30	+0.9
59,440	-		PS417_00300	0.30	+1.0
59,499	+		PS417_00300	0.35	-3.1
59,505	+		PS417_00300	0.35	+0.3
59,505	+		PS417_00300	0.35	-2.1
59,505	+		PS417_00300	0.35	+0.2
59,589	+		PS417_00300	0.43	-1.7
59,589	+		PS417_00300	0.43	-1.7
59,590	-		PS417_00300	0.43	+0.1
59,590	-		PS417_00300	0.43	+0.9