Strain Fitness in Pseudomonas simiae WCS417 around PS417_28345

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
6,117,056	+		PS417_28335	0.83	+1.5
6,117,060	+		PS417_28335	0.83	-0.7
6,117,060	+		PS417_28335	0.83	-0.9
6,117,061	-				+0.9
6,117,061	-		PS417_28335	0.84	+0.4
6,117,061	-				-0.1
6,117,061	-		PS417_28335	0.84	-1.2
6,117,297	-				-0.3
6,117,314	+				+0.3
6,117,465	+		PS417_28340	0.26	+0.0
6,117,741	+		PS417_28340	0.79	-0.5
6,117,742	-				-0.5
6,117,970	+				-0.5
6,118,011	+				+0.6
6,118,012	-				-3.0
6,118,012	-				+0.5
6,118,126	-		PS417_28345	0.10	+0.6
6,118,176	+		PS417_28345	0.14	-1.3
6,118,474	+		PS417_28345	0.34	-0.4
6,118,475	-		PS417_28345	0.34	-3.0
6,118,475	-				-0.8
6,118,510	-		PS417_28345	0.37	+1.9
6,118,519	-		PS417_28345	0.37	+0.3
6,118,519	-				+2.5
6,118,555	-		PS417_28345	0.40	+1.0
6,118,714	-		PS417_28345	0.51	+1.2
6,118,714	-		PS417_28345	0.51	+2.0
6,118,861	-		PS417_28345	0.61	+2.6
6,118,914	+		PS417_28345	0.65	-0.5
6,118,915	-		PS417_28345	0.65	+0.3
6,118,987	-		PS417_28345	0.70	+0.7
6,119,151	+		PS417_28345	0.81	-1.3
6,119,154	-		PS417_28345	0.81	-0.5
6,119,158	+		PS417_28345	0.82	+0.4
6,119,434	-				+1.2
6,119,437	+				+0.7
6,119,437	+				+0.8
6,119,438	-				+1.2
6,119,438	-				-0.8
6,119,551	-		PS417_28350	0.11	+0.9
6,119,751	+		PS417_28350	0.27	+1.5
6,119,784	-		PS417_28350	0.30	+1.5
6,119,909	-		PS417_28350	0.41	-1.7
6,119,909	-		PS417_28350	0.41	-1.4
6,120,126	+		PS417_28350	0.59	+1.5
6,120,127	-		PS417_28350	0.59	+1.1
6,120,228	+		PS417_28350	0.68	+0.3
6,120,229	-		PS417_28350	0.68	+0.5
6,120,229	-		PS417_28350	0.68	-0.5
6,120,259	-		PS417_28350	0.70	+1.5
6,120,259	-		PS417_28350	0.70	+0.1
6,120,259	-		PS417_28350	0.70	+4.8
6,120,279	+		PS417_28350	0.72	+1.2
6,120,279	+		PS417_28350	0.72	-2.1
6,120,279	+		PS417_28350	0.72	-1.0
6,120,279	+		PS417_28350	0.72	-1.5
6,120,280	-		PS417_28350	0.72	+0.5
6,120,280	-		PS417_28350	0.72	+0.1
6,120,280	-		PS417_28350	0.72	-0.1
6,120,293	-		PS417_28350	0.73	-0.8
6,120,293	-		PS417_28350	0.73	+0.6