Strain Fitness in Pseudomonas simiae WCS417 around PS417_28165

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
6,081,290	+		PS417_28160	0.81	+1.6
6,081,290	+		PS417_28160	0.81	+0.5
6,081,290	+		PS417_28160	0.81	-0.7
6,081,291	-		PS417_28160	0.81	-0.1
6,081,291	-		PS417_28160	0.81	-0.2
6,081,291	-		PS417_28160	0.81	-0.6
6,081,291	-		PS417_28160	0.81	+0.2
6,081,295	-		PS417_28160	0.82	+2.0
6,081,295	-		PS417_28160	0.82	-2.3
6,081,543	-		PS417_28160	0.87	-1.7
6,081,543	-		PS417_28160	0.87	+0.7
6,081,814	+				-3.3
6,081,815	-				+0.7
6,081,891	+				-0.2
6,081,891	+				-1.7
6,081,891	+				+1.0
6,081,987	+				-0.1
6,081,988	-				-2.9
6,081,988	-				+0.2
6,082,260	+				+0.5
6,082,261	-				+0.9
6,082,348	+		PS417_28165	0.14	-0.3
6,082,348	+		PS417_28165	0.14	-1.3
6,082,349	-		PS417_28165	0.14	-2.6
6,082,533	-		PS417_28165	0.26	-0.6
6,082,638	+		PS417_28165	0.33	-1.5
6,082,638	+		PS417_28165	0.33	-2.2
6,082,639	-		PS417_28165	0.33	+0.1
6,082,639	-		PS417_28165	0.33	-0.1
6,082,639	-		PS417_28165	0.33	-0.4
6,082,803	+		PS417_28165	0.43	-3.0
6,083,072	+		PS417_28165	0.61	+2.5
6,083,073	-		PS417_28165	0.61	-1.1
6,083,073	-		PS417_28165	0.61	-0.8
6,083,073	-		PS417_28165	0.61	-0.3
6,083,073	-		PS417_28165	0.61	-1.2
6,083,076	+		PS417_28165	0.61	-0.1
6,083,421	+		PS417_28165	0.83	-1.7
6,083,463	+		PS417_28165	0.86	-0.5
6,083,464	-		PS417_28165	0.86	+0.3
6,083,464	-		PS417_28165	0.86	+0.4
6,083,592	+				+0.1
6,083,592	+				+0.3
6,083,593	-				+0.5
6,083,593	-				-0.1
6,083,708	+				-0.8
6,083,708	+				-2.7
6,083,709	-				+0.3
6,083,721	+				+0.2
6,083,731	-				-3.0
6,083,765	+				+0.7
6,083,765	+				-0.2
6,083,765	+				-0.0
6,083,765	+				+1.2
6,083,766	-				-1.8
6,083,766	-				-1.2
6,084,011	+		PS417_28170	0.39	-1.0
6,084,011	+		PS417_28170	0.39	+0.3
6,084,012	-		PS417_28170	0.39	-2.3
6,084,074	+		PS417_28170	0.49	-1.3
6,084,075	-		PS417_28170	0.49	+0.3
6,084,108	+		PS417_28170	0.54	-2.8
6,084,213	-		PS417_28170	0.71	+0.5
6,084,466	+		PS417_28175	0.15	-0.4
6,084,466	+		PS417_28175	0.15	-0.8
6,084,467	-		PS417_28175	0.16	-0.9
6,084,479	-		PS417_28175	0.18	-0.9
6,084,547	-		PS417_28175	0.34	-2.1
6,084,550	+		PS417_28175	0.34	-0.1
6,084,600	+		PS417_28175	0.45	+1.0
6,084,600	+		PS417_28175	0.45	-0.4