Strain Fitness in Pseudomonas simiae WCS417 around PS417_27885

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
6,010,221	+		PS417_27875	0.82	+2.8
6,010,256	+		PS417_27875	0.85	+3.0
6,010,256	+		PS417_27875	0.85	+2.9
6,010,256	+				+3.6
6,010,257	-		PS417_27875	0.85	+2.6
6,010,257	-		PS417_27875	0.85	+0.7
6,010,257	-		PS417_27875	0.85	+2.7
6,010,257	-		PS417_27875	0.85	+3.0
6,010,412	-				+2.2
6,010,581	+				-1.1
6,010,582	-				+0.2
6,010,586	+				+1.5
6,010,587	-				+1.2
6,010,587	-				+1.3
6,010,590	+				+0.9
6,010,590	+				+0.2
6,010,591	-				-0.3
6,010,614	+				-0.8
6,010,984	+				+0.3
6,011,074	+				-1.7
6,011,074	+				-0.8
6,011,341	-		PS417_27885	0.27	+1.5
6,011,383	+		PS417_27885	0.32	-2.0
6,011,395	+				+2.1
6,011,395	+		PS417_27885	0.33	-3.1
6,011,395	+		PS417_27885	0.33	+1.5
6,011,630	-		PS417_27885	0.59	-1.0
6,011,680	+		PS417_27885	0.64	-1.7
6,011,681	-		PS417_27885	0.64	+0.0
6,011,878	+		PS417_27885	0.86	-0.2
6,011,881	+		PS417_27885	0.86	-1.7
6,011,882	-		PS417_27885	0.86	-2.0
6,012,008	+				+0.5
6,012,009	-				-1.7
6,012,312	-		PS417_27890	0.13	-0.2
6,012,314	-		PS417_27890	0.13	+1.1
6,012,445	+		PS417_27890	0.21	-2.7
6,012,446	-		PS417_27890	0.21	-0.5
6,012,838	+		PS417_27890	0.44	+1.0