Strain Fitness in Pseudomonas simiae WCS417 around PS417_27355

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,901,994	+				-1.0
5,901,994	+				+1.1
5,902,013	-		PS417_27350	0.11	+0.8
5,902,119	+		PS417_27350	0.27	-2.2
5,902,119	+		PS417_27350	0.27	-0.1
5,902,119	+		PS417_27350	0.27	+0.2
5,902,120	-		PS417_27350	0.27	-2.5
5,902,120	-		PS417_27350	0.27	-0.4
5,902,369	-		PS417_27350	0.65	+0.1
5,902,384	-		PS417_27350	0.68	-2.3
5,902,450	-		PS417_27350	0.78	-0.2
5,902,477	+		PS417_27350	0.82	+0.0
5,902,511	+		PS417_27350	0.87	+0.2
5,902,512	-		PS417_27350	0.87	+1.5
5,902,512	-		PS417_27350	0.87	+0.8
5,902,557	+				-0.3
5,902,616	+				-1.3
5,902,616	+				-0.1
5,902,616	+				-0.6
5,902,620	+				-1.6
5,902,620	+				-0.5
5,902,620	+				+0.2
5,902,621	-				+0.3
5,902,621	-				+0.5
5,902,621	-				+4.1
5,902,623	+				+0.8
5,902,632	+				-0.2
5,902,633	-				+1.0
5,902,647	+				-1.0
5,902,650	+				-0.6
5,902,666	-				-0.5
5,902,702	+				+0.1
5,902,705	-				+0.5
5,902,740	-				-2.2
5,902,740	-				+1.0
5,902,741	+				+1.2
5,902,741	+				-1.8
5,902,741	+				-0.1
5,902,742	-				-1.0
5,902,742	-				+0.8
5,902,831	+				-0.8
5,902,831	+				-0.5
5,902,831	+				+1.5
5,902,831	+				-0.1
5,902,831	+				-0.6
5,902,831	+				-0.1
5,902,832	-				-0.4
5,902,832	-				+0.9
5,902,832	-				+0.4
5,902,887	+				+1.0
5,903,010	-		PS417_27355	0.24	+0.7
5,903,138	+		PS417_27355	0.51	-3.8
5,903,141	+		PS417_27355	0.52	-1.3
5,903,141	+		PS417_27355	0.52	-1.8
5,903,142	-		PS417_27355	0.52	+1.5
5,903,167	+		PS417_27355	0.57	-0.6
5,903,177	+		PS417_27355	0.59	-0.4
5,903,187	-		PS417_27355	0.61	+0.4
5,903,231	+		PS417_27355	0.70	-0.5
5,903,322	+		PS417_27355	0.89	+2.2
5,903,322	+		PS417_27355	0.89	+0.7
5,903,322	+		PS417_27355	0.89	+3.9
5,903,322	+		PS417_27355	0.89	-0.2
5,903,323	-		PS417_27355	0.89	-0.1
5,903,323	-		PS417_27355	0.89	+0.6
5,903,323	-		PS417_27355	0.89	+0.5
5,903,428	-				-0.2
5,903,428	-				-0.5
5,903,442	-				+0.3
5,903,442	-				-1.4
5,903,442	-				+0.5
5,903,442	-				+0.5
5,903,456	+				+0.6
5,903,456	+				+2.5
5,903,456	+				+0.2
5,903,456	+				-0.5
5,903,457	-				+0.5
5,903,539	+				-0.4
5,903,608	+				-0.6
5,903,608	+				-0.8
5,903,608	+				-0.8
5,903,608	+				-1.1
5,903,786	-		PS417_27360	0.27	+1.5
5,903,959	-		PS417_27360	0.45	-1.7
5,904,298	+		PS417_27360	0.80	+0.1
5,904,298	+		PS417_27360	0.80	-1.1
5,904,299	-				+0.5