Strain Fitness in Pseudomonas simiae WCS417 around PS417_26955

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,820,498	+				+1.2
5,820,498	+				+0.1
5,820,499	-				+0.4
5,820,499	-				-0.1
5,820,499	-				-0.3
5,820,502	+				-0.6
5,820,502	+				-0.8
5,820,502	+				-1.9
5,820,502	+				-0.8
5,820,503	-				+1.2
5,820,503	-				-2.7
5,820,503	-				+1.1
5,820,503	-				-0.0
5,820,503	-				+0.2
5,820,573	+				+0.5
5,820,830	+		PS417_26950	0.39	-0.8
5,820,831	-		PS417_26950	0.39	-0.9
5,820,831	-		PS417_26950	0.39	+0.6
5,821,059	+		PS417_26950	0.65	+1.8
5,821,059	+		PS417_26950	0.65	-2.1
5,821,059	+		PS417_26950	0.65	-0.1
5,821,059	+		PS417_26950	0.65	-1.5
5,821,059	+		PS417_26950	0.65	+0.8
5,821,059	+		PS417_26950	0.65	+2.1
5,821,060	-		PS417_26950	0.65	-0.1
5,821,062	+		PS417_26950	0.65	+1.7
5,821,062	+		PS417_26950	0.65	-0.9
5,821,063	-		PS417_26950	0.66	-2.7
5,821,063	-		PS417_26950	0.66	-1.8
5,821,063	-		PS417_26950	0.66	-0.9
5,821,063	-		PS417_26950	0.66	-1.0
5,821,063	-		PS417_26950	0.66	-0.6
5,821,162	+		PS417_26950	0.77	-1.4
5,821,162	+		PS417_26950	0.77	-2.1
5,821,343	+				-0.8
5,823,763	+		PS417_26960	0.12	-1.3
5,824,147	+				-2.5
5,824,148	-				-1.8
5,824,231	+				-0.5
5,824,231	+				+1.1
5,824,232	-				+0.2
5,824,232	-				+0.1
5,824,244	+				-0.2
5,824,244	+				-2.3
5,824,244	+				-0.2
5,824,244	+				+2.8
5,824,244	+				-0.3
5,824,244	+				-0.2
5,824,244	+				-3.3
5,824,245	-				-0.1
5,824,245	-				-0.1
5,824,245	-				+1.0
5,824,245	-				+1.2
5,824,245	-				+0.9
5,824,245	-				+0.3
5,824,245	-				-1.7
5,824,279	-				+0.5