Strain Fitness in Pseudomonas simiae WCS417 around PS417_26655

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,763,081	+				-0.3
5,763,082	-				-3.7
5,763,082	-				-0.5
5,763,082	-				+1.0
5,763,086	-				+1.5
5,763,296	-				+2.5
5,763,367	+				+2.4
5,763,367	+				+2.9
5,763,367	+				+2.1
5,763,368	-				-1.3
5,763,386	+				-1.1
5,763,387	-				-0.5
5,763,387	-				-1.3
5,763,498	-				+0.7
5,763,501	+				+2.0
5,763,564	+				-0.7
5,763,565	-				-0.1
5,763,565	-				+0.1
5,763,565	-				+0.2
5,764,460	+		PS417_26655	0.43	+2.3
5,764,461	-		PS417_26655	0.43	+1.6
5,764,782	+		PS417_26655	0.59	+2.8
5,764,782	+		PS417_26655	0.59	+1.5
5,765,089	+		PS417_26655	0.74	+1.7
5,765,090	-		PS417_26655	0.74	+3.3
5,765,287	+		PS417_26655	0.84	+2.3
5,765,474	+				+2.6
5,765,475	-				-0.0
5,765,475	-				+3.6
5,765,486	+				+1.5
5,765,486	+				+2.1
5,765,486	+				+3.0
5,765,487	-				+1.0
5,765,810	+		PS417_26660	0.36	+2.9
5,765,810	+		PS417_26660	0.36	+3.0
5,765,811	-				+3.8
5,765,812	+		PS417_26660	0.37	+0.5
5,765,813	-		PS417_26660	0.37	+2.4
5,765,813	-		PS417_26660	0.37	+0.5
5,765,813	-		PS417_26660	0.37	+2.4
5,766,004	+		PS417_26660	0.73	+2.4
5,766,005	-		PS417_26660	0.74	+2.5
5,766,005	-		PS417_26660	0.74	+1.8
5,766,169	-				-1.5
5,766,535	-				-0.5
5,766,535	-				-1.7
5,766,538	+				+1.1
5,766,538	+				+2.0
5,766,538	+				+2.5
5,766,538	+				+2.0
5,766,538	+				+1.8
5,766,539	-				+1.0
5,766,539	-				+1.5
5,766,539	-				-3.8
5,766,539	-				+2.1
5,766,539	-				-0.9
5,766,539	-				-1.3
5,766,539	-				-0.0
5,766,606	-				-0.6
5,766,606	-				+0.7