Strain Fitness in Pseudomonas simiae WCS417 around PS417_26050

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,628,248	-		PS417_26040	0.83	-3.3
5,628,552	+				-1.1
5,628,608	-				+2.2
5,628,645	-				+1.9
5,628,675	-				+1.4
5,628,685	-				+0.9
5,628,696	+		PS417_26045	0.11	-0.9
5,628,696	+				+0.4
5,628,696	+		PS417_26045	0.11	-1.2
5,628,697	-		PS417_26045	0.11	+1.4
5,628,700	+		PS417_26045	0.12	-0.6
5,628,701	-		PS417_26045	0.12	-0.3
5,628,759	+		PS417_26045	0.25	+2.4
5,628,759	+		PS417_26045	0.25	+0.1
5,628,760	-		PS417_26045	0.26	-0.4
5,628,763	+		PS417_26045	0.26	-0.8
5,628,764	-		PS417_26045	0.27	-0.4
5,628,768	+		PS417_26045	0.27	-0.3
5,628,768	+		PS417_26045	0.27	-0.9
5,628,769	-		PS417_26045	0.28	-0.6
5,628,846	+		PS417_26045	0.45	-0.3
5,628,847	-		PS417_26045	0.45	+1.3
5,628,851	-		PS417_26045	0.46	+0.8
5,628,914	+		PS417_26045	0.60	-1.3
5,628,927	+		PS417_26045	0.63	-0.2
5,628,928	-		PS417_26045	0.64	+5.8
5,628,928	-		PS417_26045	0.64	-0.1
5,628,931	+		PS417_26045	0.64	-0.1
5,628,932	-		PS417_26045	0.64	+0.0
5,628,932	-		PS417_26045	0.64	-0.1
5,628,955	+		PS417_26045	0.70	-0.6
5,628,955	+		PS417_26045	0.70	-0.5
5,628,956	-		PS417_26045	0.70	+1.7
5,628,958	+		PS417_26045	0.70	-3.0
5,628,959	-		PS417_26045	0.70	-2.9
5,629,026	-		PS417_26045	0.86	-0.7
5,629,071	+				-0.1
5,629,071	+				+0.7
5,629,090	-				-2.1
5,629,094	+				-1.1
5,629,095	-				+1.1
5,629,197	+				-0.8
5,629,354	+		PS417_26050	0.31	-0.7
5,629,388	+		PS417_26050	0.38	-0.1
5,629,388	+		PS417_26050	0.38	-0.6
5,629,388	+		PS417_26050	0.38	-1.2
5,629,389	-		PS417_26050	0.38	+0.4
5,629,389	-		PS417_26050	0.38	-0.1
5,629,389	-		PS417_26050	0.38	-2.9
5,629,389	-		PS417_26050	0.38	-3.1
5,629,592	+		PS417_26050	0.84	-0.1
5,629,663	+				-2.8
5,629,663	+				-1.1
5,629,664	-				-0.6
5,629,682	-				+1.8
5,629,682	-				+1.2
5,629,682	-				+1.8
5,629,682	-				+2.6
5,629,682	-				+3.8
5,629,768	-				+2.3
5,629,784	-				+2.3
5,629,791	+				-3.6
5,629,830	-				+2.7
5,629,830	-				+2.1
5,629,830	-				+2.5
5,629,835	+				+0.7
5,629,835	+				-2.0
5,629,835	+				-1.7
5,629,836	-				+4.1
5,629,908	+				+0.5
5,629,908	+				+1.0
5,629,914	+				-0.6
5,629,914	+				-3.6
5,629,963	-				+2.3
5,630,054	+				-0.7
5,630,055	-				+2.5
5,630,062	+				+2.3
5,630,062	+				-0.4
5,630,062	+				-0.3
5,630,062	+				-0.6
5,630,063	-				+1.8
5,630,063	-				+2.1
5,630,063	-				+2.4
5,630,063	-				+2.6
5,630,116	+		PS417_26055	0.11	-0.7
5,630,116	+		PS417_26055	0.11	-0.6
5,630,116	+				+0.4
5,630,116	+		PS417_26055	0.11	-2.8
5,630,116	+		PS417_26055	0.11	-1.5
5,630,117	-		PS417_26055	0.11	+2.8
5,630,117	-		PS417_26055	0.11	+2.4
5,630,117	-		PS417_26055	0.11	+2.3
5,630,117	-		PS417_26055	0.11	+2.1
5,630,117	-		PS417_26055	0.11	+2.5
5,630,414	-		PS417_26055	0.26	+1.8
5,630,637	+		PS417_26055	0.38	-0.5
5,630,637	+		PS417_26055	0.38	+0.3
5,630,637	+		PS417_26055	0.38	+0.1
5,630,638	-		PS417_26055	0.38	+1.6
5,630,638	-		PS417_26055	0.38	+2.3
5,630,638	-		PS417_26055	0.38	+2.6
5,630,638	-		PS417_26055	0.38	+2.5
5,630,638	-		PS417_26055	0.38	+5.1
5,630,638	-		PS417_26055	0.38	+1.5
5,630,638	-		PS417_26055	0.38	+2.9
5,630,638	-		PS417_26055	0.38	+2.5