Strain Fitness in Pseudomonas simiae WCS417 around PS417_25950

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,603,871	-		PS417_25940	0.51	+0.5
5,604,014	+		PS417_25940	0.63	+0.3
5,604,014	+		PS417_25940	0.63	+0.4
5,604,164	+		PS417_25940	0.76	-1.7
5,604,461	+				-2.4
5,604,461	+				-1.7
5,604,462	-				+0.6
5,604,488	+				+0.1
5,604,488	+				-1.1
5,604,586	-				+1.8
5,604,636	+				-0.3
5,604,636	+				+0.6
5,604,636	+				+1.3
5,604,637	-				-0.9
5,604,637	-				+1.9
5,604,742	+				-0.1
5,604,742	+				-2.6
5,604,946	+		PS417_25950	0.14	+0.0
5,605,059	-		PS417_25950	0.23	-0.1
5,605,086	+		PS417_25950	0.25	+0.1
5,605,158	+		PS417_25950	0.31	-0.4
5,605,194	+		PS417_25950	0.34	-2.7
5,605,208	-		PS417_25950	0.35	+0.3
5,605,274	+		PS417_25950	0.40	+0.5
5,605,382	+		PS417_25950	0.49	+2.0
5,605,691	+		PS417_25950	0.73	+2.6
5,606,031	+				+1.0
5,606,032	-				-0.0
5,606,032	-				+0.9
5,606,045	+				+0.1
5,606,111	-				+0.1
5,606,156	+				+3.3
5,606,157	-				-0.6
5,606,169	+				+0.3
5,606,277	+				+0.9
5,606,294	-				-1.7
5,606,433	+		PS417_25955	0.21	+0.4
5,606,434	-		PS417_25955	0.21	+3.2
5,606,434	-		PS417_25955	0.21	-0.3
5,606,680	-		PS417_25955	0.49	-0.8
5,606,680	-		PS417_25955	0.49	+0.2
5,606,721	+		PS417_25955	0.53	+0.7
5,606,722	-		PS417_25955	0.53	-0.1
5,606,722	-		PS417_25955	0.53	-0.1
5,606,722	-		PS417_25955	0.53	-1.7
5,606,735	-		PS417_25955	0.55	-1.4
5,606,890	+		PS417_25955	0.72	+0.1
5,606,890	+		PS417_25955	0.72	-1.6