Strain Fitness in Pseudomonas simiae WCS417 around PS417_25895

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,593,144	+		PS417_25885	0.77	+0.1
5,593,144	+		PS417_25885	0.77	-1.4
5,593,144	+		PS417_25885	0.77	-2.2
5,593,145	-		PS417_25885	0.78	-0.7
5,593,145	-		PS417_25885	0.78	-0.3
5,593,147	-		PS417_25885	0.78	+1.7
5,593,147	-		PS417_25885	0.78	-1.1
5,593,237	+		PS417_25885	0.80	+0.3
5,593,322	+		PS417_25885	0.82	-0.4
5,593,339	-		PS417_25885	0.83	+1.4
5,593,339	-		PS417_25885	0.83	-3.3
5,593,493	+		PS417_25885	0.87	+0.3
5,593,525	+		PS417_25885	0.88	+0.1
5,593,631	+				-0.2
5,593,678	+				-0.2
5,593,679	-				+1.0
5,593,936	-				+0.7
5,593,936	-				+0.3
5,593,982	+				-2.3
5,594,487	-		PS417_25895	0.85	+1.2
5,594,514	-				-1.1
5,594,514	-				+0.5
5,594,573	+				+0.4
5,594,573	+				-0.6
5,594,573	+				+1.4
5,594,573	+				+0.6
5,594,574	-				-0.8
5,594,574	-				+1.0
5,594,574	-				+3.0
5,594,588	+				-0.2
5,595,129	+		PS417_25900	0.54	+0.1
5,595,222	+		PS417_25900	0.64	-0.2
5,595,222	+		PS417_25900	0.64	+2.9
5,595,222	+		PS417_25900	0.64	-2.7
5,595,223	-		PS417_25900	0.64	+0.1
5,595,223	-		PS417_25900	0.64	+1.6
5,595,223	-		PS417_25900	0.64	-1.0
5,595,223	-		PS417_25900	0.64	+0.5
5,595,292	-		PS417_25900	0.72	-0.0
5,595,292	-		PS417_25900	0.72	-1.4
5,595,530	+				-1.7
5,595,530	+				-0.5