Strain Fitness in Pseudomonas simiae WCS417 around PS417_25880

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,588,209	+				-1.2
5,590,161	-				+0.2
5,590,266	-				-1.2
5,590,266	-				-2.3
5,590,435	+				-0.3
5,590,576	+				-1.6
5,590,577	-				-0.6
5,590,577	-				-0.0
5,590,577	-				+1.4
5,590,667	-		PS417_25885	0.11	-1.4
5,590,688	+		PS417_25885	0.12	-0.3
5,590,696	+		PS417_25885	0.12	-0.8
5,590,696	+		PS417_25885	0.12	+0.0
5,590,864	+		PS417_25885	0.17	-0.6
5,590,864	+		PS417_25885	0.17	-0.5
5,590,865	-		PS417_25885	0.17	+0.7
5,591,050	+		PS417_25885	0.22	-0.2
5,591,051	-		PS417_25885	0.22	-2.9
5,591,051	-		PS417_25885	0.22	+1.8