Strain Fitness in Pseudomonas simiae WCS417 around PS417_25345

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,487,186	+		PS417_25340	0.23	-1.8
5,487,186	+		PS417_25340	0.23	-0.1
5,487,186	+				+1.4
5,487,187	-		PS417_25340	0.23	-4.1
5,487,187	-		PS417_25340	0.23	-2.4
5,487,241	-		PS417_25340	0.29	-2.5
5,487,329	+		PS417_25340	0.38	-2.6
5,487,376	-		PS417_25340	0.43	-1.6
5,487,495	+		PS417_25340	0.56	-0.8
5,487,499	+		PS417_25340	0.56	-0.6
5,487,752	+		PS417_25340	0.83	-2.7
5,487,790	+		PS417_25340	0.87	-2.0
5,487,790	+		PS417_25340	0.87	-0.1
5,487,791	-		PS417_25340	0.87	-1.0
5,487,822	+				+0.5
5,487,823	-				-0.9
5,487,823	-				+0.4
5,487,823	-				+0.6
5,487,828	-				+0.3
5,487,828	-				+0.4
5,487,828	-				+0.9
5,487,858	+				+0.1
5,487,858	+				+1.1
5,487,858	+				-1.2
5,487,859	-				+0.3
5,487,859	-				-0.2
5,487,859	-				-0.2
5,487,859	-				-1.3
5,487,920	+				-0.7
5,487,993	-				-1.4
5,488,085	+				-0.9
5,488,665	+				-1.3
5,488,665	+				-0.7
5,488,666	-				-1.6
5,488,692	+				-1.9
5,488,693	-				+0.8
5,488,693	-				-0.5
5,488,770	+				+0.6
5,488,770	+				+0.1
5,488,771	-				-0.8
5,488,771	-				-0.6
5,488,771	-				+0.1
5,488,932	+		PS417_25350	0.24	-2.2
5,488,933	-		PS417_25350	0.24	-0.5
5,488,933	-		PS417_25350	0.24	-2.5
5,488,933	-		PS417_25350	0.24	+1.3
5,488,950	+		PS417_25350	0.26	+1.1
5,488,950	+		PS417_25350	0.26	+0.6
5,488,951	-		PS417_25350	0.26	+0.8
5,488,951	-		PS417_25350	0.26	+0.2
5,488,951	-		PS417_25350	0.26	+0.3
5,488,951	-		PS417_25350	0.26	-0.6
5,488,962	+		PS417_25350	0.27	+1.7
5,489,015	+		PS417_25350	0.32	-0.3
5,489,039	+		PS417_25350	0.34	+1.7
5,489,040	-		PS417_25350	0.34	+1.8
5,489,052	+		PS417_25350	0.35	-2.0
5,489,052	+		PS417_25350	0.35	-1.3
5,489,053	-		PS417_25350	0.35	-1.0
5,489,122	-		PS417_25350	0.41	+0.1
5,489,122	-		PS417_25350	0.41	-0.9
5,489,148	+		PS417_25350	0.44	-2.4
5,489,149	-		PS417_25350	0.44	-0.7
5,489,343	+		PS417_25350	0.61	-0.5
5,489,344	-		PS417_25350	0.61	+0.6
5,489,604	+		PS417_25350	0.85	+0.1
5,489,604	+		PS417_25350	0.85	-1.8
5,489,637	+		PS417_25350	0.88	+0.7
5,489,637	+		PS417_25350	0.88	+0.5
5,489,638	-		PS417_25350	0.88	-0.5