Strain Fitness in Pseudomonas simiae WCS417 around PS417_25235

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,467,658	+		PS417_25225	0.54	+1.7
5,467,658	+		PS417_25225	0.54	-1.4
5,467,802	-		PS417_25225	0.88	+1.4
5,468,505	+				+0.1
5,468,506	-				-4.0
5,468,548	+				-1.6
5,468,587	-				-1.2
5,468,587	-				+3.0
5,468,591	-				-0.9
5,468,616	+				-1.7
5,468,616	+				-0.7
5,468,617	-				-2.7
5,468,617	-				-2.0
5,468,617	-				+0.5
5,468,700	-				+1.6
5,468,700	-		PS417_25235	0.12	-1.0
5,468,745	+		PS417_25235	0.18	-0.3
5,468,745	+		PS417_25235	0.18	-0.4
5,468,745	+		PS417_25235	0.18	-0.5
5,468,745	+		PS417_25235	0.18	-0.4
5,468,745	+		PS417_25235	0.18	+1.0
5,468,746	-		PS417_25235	0.18	+0.1
5,468,811	+		PS417_25235	0.27	-1.7
5,468,812	-		PS417_25235	0.27	-1.5
5,468,812	-		PS417_25235	0.27	-1.2
5,468,838	+		PS417_25235	0.31	-1.5
5,468,839	-		PS417_25235	0.31	-0.6
5,468,839	-		PS417_25235	0.31	+0.1
5,468,923	-		PS417_25235	0.43	-0.2
5,468,932	-		PS417_25235	0.44	+1.1
5,468,962	-		PS417_25235	0.48	+1.4
5,468,975	-		PS417_25235	0.50	-1.2
5,469,015	+		PS417_25235	0.56	+0.6
5,469,016	-		PS417_25235	0.56	-1.7
5,469,016	-		PS417_25235	0.56	-1.7
5,469,016	-		PS417_25235	0.56	+0.9
5,469,016	-		PS417_25235	0.56	-0.4
5,469,133	-		PS417_25235	0.72	-0.1
5,469,188	+		PS417_25235	0.80	+0.7
5,469,188	+		PS417_25235	0.80	-1.9
5,469,189	-		PS417_25235	0.80	-0.1
5,469,225	+		PS417_25235	0.85	-1.4
5,469,348	+				+1.6
5,469,349	-				+0.4