Strain Fitness in Pseudomonas simiae WCS417 around PS417_24705

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,359,641	-				+0.6
5,359,702	-				-2.4
5,359,702	-				-0.9
5,360,279	-		PS417_24705	0.50	-2.5
5,360,283	+		PS417_24705	0.50	-0.2
5,360,283	+		PS417_24705	0.50	-2.7
5,360,650	-		PS417_24705	0.82	-1.2
5,360,880	-				-0.3
5,360,909	-				+0.3
5,360,977	-				+0.8
5,361,038	+				-0.9
5,361,038	+				+1.4
5,361,039	-				+1.2
5,361,039	-				+0.1
5,361,043	-				+0.1
5,361,086	+				-0.8
5,361,086	+				+1.1
5,361,087	-				+0.7
5,361,087	-				-0.5
5,361,140	+				-0.6
5,361,141	-				+1.4
5,361,182	-		PS417_24710	0.14	+2.3
5,361,203	-		PS417_24710	0.16	+1.2
5,361,319	+		PS417_24710	0.28	-3.5
5,361,622	-		PS417_24710	0.58	+1.4
5,361,622	-		PS417_24710	0.58	+0.6
5,361,673	-		PS417_24710	0.63	+2.1
5,361,673	-		PS417_24710	0.63	+0.9
5,361,745	-		PS417_24710	0.70	+1.2
5,361,745	-		PS417_24710	0.70	+0.5
5,361,772	-		PS417_24710	0.73	+0.4
5,361,793	-		PS417_24710	0.75	+1.0