Strain Fitness in Pseudomonas simiae WCS417 around PS417_24405

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,298,175	+		PS417_24400	0.83	+1.7
5,298,334	+				+0.5
5,298,334	+				-1.6
5,298,335	-				-0.3
5,298,349	+				+1.8
5,298,350	-				+0.0
5,298,350	-				+0.4
5,298,350	-				-2.6
5,298,419	+				+0.1
5,298,421	+				-0.2
5,298,421	+				-1.9
5,298,422	-				+0.4
5,298,422	-				-0.3
5,298,556	-				+0.0
5,298,580	-				-3.2
5,298,580	-				-0.6
5,298,835	+		PS417_24405	0.33	+0.2
5,298,850	-		PS417_24405	0.36	-0.6
5,298,850	-		PS417_24405	0.36	-0.4
5,298,928	+		PS417_24405	0.48	-1.9
5,298,998	+		PS417_24405	0.60	-0.9
5,298,998	+		PS417_24405	0.60	+0.4
5,299,024	+				-0.2
5,299,025	-		PS417_24405	0.64	-0.7
5,299,025	-		PS417_24405	0.64	-0.5
5,299,025	-		PS417_24405	0.64	+0.2
5,299,172	-		PS417_24405	0.88	-0.8
5,299,236	-				-0.4
5,299,411	+				+1.1
5,299,411	+				+1.7
5,299,480	+				+0.1
5,299,560	+				-0.2
5,299,560	+				-0.7
5,299,567	+				+3.7
5,299,597	-				-0.2
5,299,597	-		PS417_24410	0.10	-3.3
5,299,828	+		PS417_24410	0.19	+0.5
5,299,915	+		PS417_24410	0.22	-1.1
5,299,916	-		PS417_24410	0.22	-0.4
5,299,973	+		PS417_24410	0.24	+0.2
5,299,975	+		PS417_24410	0.24	-2.1
5,299,975	+		PS417_24410	0.24	-1.9
5,299,975	+		PS417_24410	0.24	-0.5
5,299,975	+		PS417_24410	0.24	-0.1
5,299,976	-		PS417_24410	0.24	+0.3
5,299,976	-		PS417_24410	0.24	-3.6
5,299,976	-		PS417_24410	0.24	-1.1
5,299,976	-		PS417_24410	0.24	-0.6
5,300,005	+		PS417_24410	0.25	+0.3
5,300,006	-		PS417_24410	0.25	+1.1
5,300,198	-		PS417_24410	0.33	-2.9
5,300,198	-				+1.8