Strain Fitness in Pseudomonas simiae WCS417 around PS417_23665

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,116,587	+				+2.7
5,117,029	-		PS417_23660	0.48	+0.1
5,117,029	-		PS417_23660	0.48	+1.0
5,117,029	-		PS417_23660	0.48	-0.3
5,117,032	+		PS417_23660	0.48	-0.5
5,117,187	+		PS417_23660	0.65	+0.4
5,117,187	+		PS417_23660	0.65	+2.5
5,117,187	+		PS417_23660	0.65	+1.4
5,117,188	-		PS417_23660	0.65	+2.1
5,117,188	-		PS417_23660	0.65	+2.5
5,117,188	-		PS417_23660	0.65	-0.2
5,117,188	-		PS417_23660	0.65	+0.8
5,117,268	+		PS417_23660	0.73	-0.7
5,117,269	-		PS417_23660	0.73	+2.1
5,117,322	-		PS417_23660	0.79	+0.4
5,117,334	+				+1.4
5,117,335	-		PS417_23660	0.81	+1.3
5,117,335	-		PS417_23660	0.81	+2.6
5,117,335	-		PS417_23660	0.81	+0.6
5,117,335	-		PS417_23660	0.81	-1.2
5,117,535	-				+0.3
5,117,538	+				-0.6
5,117,538	+				+0.6
5,117,539	-				-0.2
5,117,539	-				+1.2
5,117,539	-				-1.8
5,117,539	-				-2.1
5,117,541	+				-2.8
5,117,541	+				+0.2
5,117,541	+				-1.6
5,117,621	+		PS417_23665	0.22	-3.2
5,117,621	+		PS417_23665	0.22	-1.1
5,117,621	+		PS417_23665	0.22	-0.1
5,117,691	-		PS417_23665	0.46	-1.0
5,117,691	-		PS417_23665	0.46	-1.8
5,117,691	-		PS417_23665	0.46	-0.5
5,117,861	+				-0.4
5,117,862	-				-1.4
5,118,309	+		PS417_23670	0.40	-0.2
5,118,310	-		PS417_23670	0.40	-2.4
5,118,310	-		PS417_23670	0.40	-0.2
5,118,696	+		PS417_23670	0.74	-0.2
5,118,697	-		PS417_23670	0.74	+0.8
5,118,789	+		PS417_23670	0.82	+0.4
5,118,813	-				+1.4