Strain Fitness in Pseudomonas simiae WCS417 around PS417_23520

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,088,617	-				+1.4
5,088,689	-				-0.6
5,088,736	-				-1.2
5,088,736	-				+1.3
5,088,751	-				+1.7
5,089,003	-		PS417_23520	0.17	-0.4
5,089,081	-		PS417_23520	0.27	+0.2
5,089,192	+		PS417_23520	0.42	-2.0
5,089,192	+		PS417_23520	0.42	+0.4
5,089,192	+		PS417_23520	0.42	-0.2
5,089,192	+		PS417_23520	0.42	-0.8
5,089,193	-		PS417_23520	0.42	-0.9
5,089,193	-		PS417_23520	0.42	-1.2
5,089,639	-				-1.2
5,089,981	-		PS417_23525	0.24	+0.6
5,089,981	-		PS417_23525	0.24	+0.2
5,090,080	-		PS417_23525	0.32	+0.8
5,090,080	-		PS417_23525	0.32	-2.0
5,090,127	+		PS417_23525	0.36	+1.3
5,090,128	-		PS417_23525	0.36	-0.7
5,090,145	-		PS417_23525	0.37	+1.8
5,090,300	-		PS417_23525	0.50	-0.6
5,090,326	-		PS417_23525	0.52	+0.2
5,090,326	-		PS417_23525	0.52	-0.3
5,090,397	+		PS417_23525	0.58	+0.0