Strain Fitness in Pseudomonas simiae WCS417 around PS417_22720

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,920,952	+				-1.1
4,920,978	-				-1.0
4,921,072	-				-0.7
4,921,072	-		PS417_22715	0.25	-3.0
4,921,313	-		PS417_22715	0.65	+0.7
4,921,484	-				+0.5
4,921,584	+				+2.3
4,921,599	-				+0.1
4,921,644	+				-0.1
4,921,749	+		PS417_22720	0.15	+0.1
4,921,749	+		PS417_22720	0.15	+1.7
4,921,749	+		PS417_22720	0.15	+0.4
4,921,750	-		PS417_22720	0.15	+0.1
4,921,750	-		PS417_22720	0.15	+1.4
4,922,086	+				+0.0
4,922,087	-				-0.0
4,922,087	-				-1.3
4,922,087	-				+0.6
4,922,087	-				+0.3
4,922,101	-				-0.5
4,922,101	-				+1.0
4,922,101	-				-0.4
4,922,108	-				-1.3
4,922,168	-				-0.3
4,922,168	-				+0.1
4,922,193	+				+0.3
4,922,193	+				+1.5
4,922,194	-				-0.2
4,922,194	-				+1.4
4,922,194	-				-2.0
4,922,229	+				-1.3
4,922,229	+				+0.4
4,922,229	+				-0.1
4,922,229	+				+1.3
4,922,230	-				+0.3
4,922,698	+		PS417_22725	0.22	+1.5
4,922,699	-		PS417_22725	0.22	+0.3
4,922,837	+		PS417_22725	0.28	-0.1
4,922,838	-		PS417_22725	0.28	-0.3