Strain Fitness in Pseudomonas simiae WCS417 around PS417_21915

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,755,212	+				-0.5
4,755,212	+				-0.8
4,755,212	+				-1.9
4,755,212	+				-2.0
4,755,213	-				+0.3
4,755,213	-				-2.1
4,755,247	-				-1.0
4,755,247	-				-1.0
4,755,247	-				-1.8
4,755,378	-		PS417_21910	0.18	-0.8
4,755,450	-		PS417_21910	0.27	-0.3
4,755,487	-		PS417_21910	0.32	-2.5
4,755,502	-		PS417_21910	0.34	+0.0
4,755,570	+		PS417_21910	0.43	-0.4
4,755,570	+		PS417_21910	0.43	-0.7
4,755,571	-		PS417_21910	0.43	+0.0
4,755,571	-		PS417_21910	0.43	+1.3
4,755,571	-		PS417_21910	0.43	-0.3
4,755,571	-		PS417_21910	0.43	+0.4
4,755,652	-		PS417_21910	0.54	-0.4
4,755,688	+		PS417_21910	0.58	-1.3
4,755,688	+		PS417_21910	0.58	-0.8
4,755,729	+		PS417_21910	0.64	-0.8
4,755,730	-		PS417_21910	0.64	+1.3
4,755,913	+		PS417_21910	0.88	+0.1
4,755,913	+		PS417_21910	0.88	-0.8
4,755,913	+		PS417_21910	0.88	-0.1
4,755,914	-		PS417_21910	0.88	+0.2
4,755,915	+		PS417_21910	0.88	+0.3
4,755,915	+		PS417_21910	0.88	+0.2
4,755,915	+		PS417_21910	0.88	-0.5
4,755,916	-		PS417_21910	0.88	-2.0
4,755,916	-		PS417_21910	0.88	+0.3
4,755,916	-		PS417_21910	0.88	+1.3
4,755,916	-		PS417_21910	0.88	-1.5
4,756,019	+				+0.2
4,756,020	-				-3.3
4,756,101	-				+1.3
4,756,134	+				+1.2
4,756,318	-		PS417_21915	0.23	-3.0
4,756,420	-		PS417_21915	0.34	+1.3
4,756,683	+		PS417_21915	0.63	+1.3
4,756,684	-		PS417_21915	0.63	-1.0
4,756,684	-		PS417_21915	0.63	+0.9
4,756,975	-				+0.8
4,757,145	-		PS417_21920	0.14	-0.5
4,757,180	+				+0.3
4,757,339	+		PS417_21920	0.35	+0.1
4,757,340	-		PS417_21920	0.36	-1.6
4,757,340	-		PS417_21920	0.36	-0.9
4,757,343	+		PS417_21920	0.36	-0.2
4,757,343	+		PS417_21920	0.36	-0.5
4,757,343	+		PS417_21920	0.36	-0.9
4,757,343	+		PS417_21920	0.36	-1.0
4,757,344	-		PS417_21920	0.36	+0.7
4,757,344	-		PS417_21920	0.36	-1.5
4,757,344	-		PS417_21920	0.36	+0.0
4,757,395	-		PS417_21920	0.42	+2.1
4,757,437	+		PS417_21920	0.46	-0.5
4,757,620	+		PS417_21920	0.67	-0.4
4,757,721	+		PS417_21920	0.78	-1.0
4,757,721	+		PS417_21920	0.78	+0.7
4,757,721	+		PS417_21920	0.78	+0.8
4,757,721	+		PS417_21920	0.78	-1.0
4,757,825	-		PS417_21920	0.90	-0.0
4,757,982	+				-1.3