Strain Fitness in Pseudomonas simiae WCS417 around PS417_21805

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,734,315	-		PS417_21800	0.35	-1.3
4,734,328	+		PS417_21800	0.36	-0.1
4,734,576	-				+0.3
4,734,584	+				+1.3
4,734,585	-				-1.5
4,734,687	-		PS417_21800	0.67	+1.1
4,734,687	-		PS417_21800	0.67	-0.1
4,734,841	+		PS417_21800	0.80	+0.3
4,734,841	+		PS417_21800	0.80	-0.7
4,734,842	-		PS417_21800	0.80	+0.3
4,734,842	-				-2.3
4,734,902	+		PS417_21800	0.85	-1.6
4,734,905	+		PS417_21800	0.85	-0.8
4,734,962	+				+0.0
4,734,998	+				+1.3
4,734,998	+				-0.8
4,734,998	+				-1.3
4,734,999	-				-0.2
4,734,999	-				+1.0
4,735,099	-				-2.3
4,735,099	-				-0.5
4,735,099	-				-0.0
4,735,099	-				-0.7
4,735,182	-				-0.1
4,735,188	+				+0.5
4,735,189	-				-1.5
4,735,189	-				-0.1
4,735,286	-		PS417_21805	0.16	+0.8
4,735,323	-		PS417_21805	0.20	-0.5
4,735,323	-		PS417_21805	0.20	-0.7
4,735,408	-		PS417_21805	0.29	-1.5
4,735,408	-		PS417_21805	0.29	-1.9
4,735,776	-		PS417_21805	0.68	+0.1
4,735,776	-		PS417_21805	0.68	-0.2
4,735,776	-		PS417_21805	0.68	-2.3
4,735,776	-		PS417_21805	0.68	+0.6
4,735,833	-		PS417_21805	0.74	-0.5
4,735,848	-		PS417_21805	0.76	-0.4
4,735,875	-		PS417_21805	0.79	-1.2
4,735,937	+		PS417_21805	0.85	-0.6
4,735,938	-		PS417_21805	0.85	+0.6
4,736,076	-				-0.8
4,736,136	-				+0.7
4,736,535	-				-0.5
4,736,535	-				-0.6
4,736,854	+				-0.0
4,736,855	-				-0.6
4,736,855	-				-0.2
4,736,855	-				-0.8
4,736,883	+				+1.1
4,736,884	-				-1.2
4,736,884	-				-1.4
4,736,935	+		PS417_21815	0.12	-0.5
4,736,936	-		PS417_21815	0.12	+1.0