Strain Fitness in Pseudomonas simiae WCS417 around PS417_21625

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,691,109	+				+0.3
4,691,110	-				-1.1
4,691,358	-		PS417_21615	0.76	+0.0
4,691,625	+				+0.5
4,691,625	+				+1.2
4,691,625	+				+1.4
4,691,625	+				-0.2
4,691,626	-				-1.5
4,691,626	-				-1.1
4,691,626	-				-1.8
4,691,626	-				-0.6
4,691,626	-				-0.5
4,691,696	+				-0.9
4,691,699	-				-0.1
4,691,699	-				-0.5
4,691,813	+				+0.4
4,691,834	+				-0.2
4,691,835	-				-2.1
4,691,930	+				+0.6
4,691,930	+				+0.8
4,691,931	-				+0.4
4,691,986	+				-0.7
4,691,986	+				-0.7
4,691,989	-				-1.0
4,692,045	-		PS417_21625	0.17	-3.1
4,692,623	+		PS417_21630	0.14	+1.6
4,692,632	+		PS417_21630	0.15	+1.3
4,692,948	+		PS417_21630	0.37	-0.3
4,693,236	-		PS417_21630	0.57	+1.3
4,693,293	-		PS417_21630	0.61	+0.3