Strain Fitness in Pseudomonas simiae WCS417 around PS417_21550

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,680,010	+				-0.6
4,680,011	-				-0.2
4,680,222	+		PS417_21550	0.14	+2.0
4,680,223	-		PS417_21550	0.14	+0.6
4,680,360	+		PS417_21550	0.27	+0.3
4,680,360	+		PS417_21550	0.27	+0.5
4,680,361	-		PS417_21550	0.27	-0.1
4,680,361	-		PS417_21550	0.27	+0.5
4,680,361	-		PS417_21550	0.27	+1.9
4,680,361	-		PS417_21550	0.27	-0.7
4,680,361	-		PS417_21550	0.27	+2.5
4,680,443	-		PS417_21550	0.35	+0.7
4,680,443	-		PS417_21550	0.35	+0.6
4,680,484	-		PS417_21550	0.38	-3.2
4,680,613	+		PS417_21550	0.50	-0.9
4,680,655	-		PS417_21550	0.54	+1.3
4,680,663	+		PS417_21550	0.55	+0.7
4,680,733	+		PS417_21550	0.61	+0.1
4,680,733	+		PS417_21550	0.61	-0.3
4,680,734	-		PS417_21550	0.62	+0.3
4,680,821	+		PS417_21550	0.70	-2.5
4,680,822	-		PS417_21550	0.70	+0.2
4,680,869	-		PS417_21550	0.74	-0.4
4,680,869	-		PS417_21550	0.74	+0.1
4,680,926	+		PS417_21550	0.79	+0.4
4,680,927	-		PS417_21550	0.79	+0.9
4,681,016	-		PS417_21550	0.88	+0.3
4,681,034	+		PS417_21550	0.89	-0.7
4,681,034	+		PS417_21550	0.89	-0.7
4,681,034	+		PS417_21550	0.89	+0.0
4,681,035	-				-0.7
4,681,049	-				-1.3
4,681,070	+				-1.0
4,681,071	-				-0.7
4,681,147	+				-1.3
4,681,163	+				+0.5
4,681,163	+				+1.2
4,681,179	+				-1.6
4,681,179	+				+0.3
4,681,211	-				+0.5
4,681,211	-				-1.3
4,681,243	-				-1.7
4,681,243	-				+0.2
4,681,266	-				+0.2
4,681,313	+				-0.5
4,681,313	+				+0.3
4,681,315	+				-0.5
4,681,397	+				+1.8
4,681,397	+				+1.2
4,681,398	-				+1.4
4,681,398	-				+1.3
4,681,424	-				+1.4
4,681,692	-		PS417_21555	0.28	+1.8
4,681,719	-		PS417_21555	0.30	+1.1
4,681,733	+		PS417_21555	0.31	+1.7
4,681,733	+				-0.3
4,681,986	-		PS417_21555	0.50	+0.6
4,682,057	+		PS417_21555	0.55	+1.2
4,682,057	+		PS417_21555	0.55	+1.7
4,682,058	-		PS417_21555	0.56	+1.5
4,682,058	-		PS417_21555	0.56	+1.4
4,682,073	-		PS417_21555	0.57	+1.6
4,682,092	-		PS417_21555	0.58	+1.8