Strain Fitness in Pseudomonas simiae WCS417 around PS417_20880

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,537,392	+		PS417_20875	0.75	+1.3
4,537,392	+		PS417_20875	0.75	+0.3
4,537,621	-		PS417_20875	0.81	-2.2
4,537,755	+		PS417_20875	0.85	+0.2
4,537,790	-		PS417_20875	0.86	+1.1
4,537,790	-		PS417_20875	0.86	-0.2
4,537,929	+				+1.4
4,537,929	+				-4.2
4,537,930	-				-0.5
4,537,930	-				-0.3
4,538,442	-		PS417_20880	0.25	-2.1
4,538,666	+		PS417_20880	0.59	-2.5
4,538,666	+		PS417_20880	0.59	-0.6
4,538,962	-				+0.7
4,538,978	-				+0.4
4,539,090	+				-0.6
4,539,091	-				-0.7
4,539,165	-				+2.4
4,539,193	+				+0.1
4,539,287	+				+0.3
4,539,288	-				-0.9