Strain Fitness in Pseudomonas simiae WCS417 around PS417_20385

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,421,235	-				+2.2
4,421,270	-				+1.8
4,421,281	+				-0.3
4,421,281	+				-1.1
4,421,282	-				-1.3
4,421,293	+				-0.1
4,421,325	+				-1.0
4,421,327	+				+1.5
4,421,327	+				-0.8
4,421,327	+				-0.5
4,421,327	+				-3.0
4,421,328	-				-0.9
4,421,328	-				+2.3
4,421,466	+				+0.3
4,421,549	+				+1.1
4,421,549	+				-1.0
4,421,550	-				+1.0
4,421,550	-				-0.3
4,421,550	-				-0.3
4,421,581	+				-0.6
4,421,581	+				+0.3
4,421,581	+				+0.6
4,421,643	+				-0.7
4,421,643	+				-0.4
4,421,643	+				-0.4
4,421,684	+		PS417_20380	0.11	-0.7
4,421,685	-		PS417_20380	0.11	-1.7
4,421,777	+		PS417_20380	0.36	-1.0
4,421,778	-		PS417_20380	0.36	+1.6
4,421,785	+		PS417_20380	0.38	+1.2
4,421,819	+		PS417_20380	0.47	+0.5
4,421,819	+		PS417_20380	0.47	-0.3
4,421,820	-		PS417_20380	0.47	-1.9
4,421,848	+		PS417_20380	0.55	-2.1
4,421,885	-		PS417_20380	0.65	-1.2
4,421,962	+		PS417_20380	0.85	-2.8
4,421,963	-		PS417_20380	0.86	-1.4
4,421,976	-		PS417_20380	0.89	+3.6
4,422,058	-				+0.6
4,422,067	-				+0.5
4,422,067	-				-1.6
4,422,067	-				+1.1
4,422,067	-				-0.2
4,422,114	+				+0.2
4,422,114	+				-0.0
4,422,114	+				+0.6
4,422,115	-				+0.3
4,422,216	+		PS417_20385	0.22	-0.8
4,422,216	+		PS417_20385	0.22	-0.7
4,422,289	+		PS417_20385	0.42	+0.0
4,422,289	+		PS417_20385	0.42	-1.0
4,422,290	-				+1.9
4,422,494	+				-0.1
4,422,494	+				-1.0
4,422,494	+				-0.1
4,422,494	+				+0.1
4,422,494	+				-0.7
4,422,495	-				-1.7
4,422,495	-				-0.3
4,422,495	-				-1.3
4,422,495	-				-0.8
4,422,495	-				+0.1
4,422,495	-				-1.2
4,422,495	-				+0.9
4,422,496	+				+1.5
4,422,497	-				+0.3
4,422,512	+				-1.2
4,422,512	+				+0.4
4,422,512	+				+0.5
4,422,512	+				+1.3
4,422,513	-				+0.3
4,422,513	-				+1.5
4,422,513	-				-0.6
4,422,513	-				+0.7
4,422,515	+				+0.2
4,422,516	-				-0.1
4,422,516	-				-2.9
4,422,516	-				+1.4
4,422,534	-				+2.3
4,422,596	-				+1.1
4,422,596	-				-0.3
4,422,596	-				+1.1
4,422,596	-				-0.3
4,422,596	-				+0.3
4,422,596	-				+0.3
4,422,651	+				-0.6
4,422,652	-				+0.4
4,422,732	+				-2.9
4,422,808	+		PS417_20390	0.14	-0.3
4,422,809	-		PS417_20390	0.14	-0.7
4,422,851	+		PS417_20390	0.16	+0.7
4,422,851	+		PS417_20390	0.16	-2.3
4,422,852	-		PS417_20390	0.16	-2.2
4,422,911	-		PS417_20390	0.19	-0.2
4,422,911	-		PS417_20390	0.19	-0.0
4,422,948	+		PS417_20390	0.21	-0.8
4,423,031	+		PS417_20390	0.25	-0.0
4,423,031	+		PS417_20390	0.25	-1.2
4,423,031	+		PS417_20390	0.25	+1.9
4,423,032	-		PS417_20390	0.25	+0.6
4,423,033	+		PS417_20390	0.25	+0.9
4,423,033	+		PS417_20390	0.25	-0.6
4,423,033	+				+0.3
4,423,033	+		PS417_20390	0.25	-0.0
4,423,034	-				+0.3
4,423,034	-		PS417_20390	0.25	+2.5
4,423,034	-		PS417_20390	0.25	-0.2
4,423,034	-		PS417_20390	0.25	-2.5
4,423,034	-		PS417_20390	0.25	-1.9
4,423,034	-		PS417_20390	0.25	-2.7
4,423,034	-				+1.3
4,423,034	-		PS417_20390	0.25	+0.5
4,423,082	+		PS417_20390	0.27	-0.2
4,423,083	-		PS417_20390	0.27	-1.0
4,423,083	-		PS417_20390	0.27	+0.2
4,423,123	+				-1.7
4,423,124	-		PS417_20390	0.29	-1.3
4,423,124	-		PS417_20390	0.29	-0.6
4,423,149	-		PS417_20390	0.31	-0.8
4,423,403	-		PS417_20390	0.43	+0.6
4,423,503	+		PS417_20390	0.48	-1.5
4,423,503	+		PS417_20390	0.48	+0.9
4,423,503	+		PS417_20390	0.48	-1.3
4,423,503	+		PS417_20390	0.48	+0.1
4,423,503	+		PS417_20390	0.48	+0.4
4,423,504	-		PS417_20390	0.48	+1.0
4,423,504	-		PS417_20390	0.48	-1.3
4,423,504	-		PS417_20390	0.48	-2.6
4,423,504	-		PS417_20390	0.48	-2.5
4,423,504	-		PS417_20390	0.48	-2.6
4,423,504	-		PS417_20390	0.48	-1.9