Strain Fitness in Pseudomonas simiae WCS417 around PS417_19980

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,339,512	+				-0.5
4,339,770	-		PS417_19975	0.60	+1.1
4,339,954	+				-0.7
4,339,955	-				-0.3
4,339,985	-				-0.7
4,340,045	+				-3.3
4,340,232	-				+0.5
4,340,232	-				+0.0
4,340,592	+		PS417_19980	0.77	+1.3
4,340,648	-				+0.2
4,340,648	-				-0.2
4,340,677	-				+0.3
4,340,681	+				-0.9
4,340,682	-				-1.5
4,340,682	-				+0.9
4,340,682	-				+0.0
4,340,682	-				+0.8
4,340,682	-				-0.3
4,340,942	-				+2.3
4,340,942	-				+0.5
4,340,942	-				+0.5
4,340,942	-				+0.2
4,340,945	+				-1.4
4,340,945	+				+1.3
4,340,946	-				-0.2
4,340,950	-				-0.6
4,340,980	-				-3.7
4,341,043	+				+0.4
4,341,074	-				+0.3
4,341,090	-				-0.5
4,341,102	-				+0.9
4,341,104	+				-1.8
4,341,104	+				-1.0
4,341,105	-				-0.8
4,341,105	-				-3.0
4,341,105	-				-1.0
4,341,256	+		PS417_19985	0.67	+0.7
4,341,267	+		PS417_19985	0.72	+1.5
4,341,396	-				-0.9
4,341,431	+				+1.9
4,341,476	+				-0.7
4,341,487	+				-4.2
4,341,496	-				+0.4
4,341,606	+				-2.3
4,341,606	+				-0.4
4,341,606	+				-0.3
4,341,607	-				-0.4
4,341,607	-				+0.2
4,341,607	-				+0.6
4,341,637	+				+0.1