Strain Fitness in Pseudomonas simiae WCS417 around PS417_19975

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,338,603	-		PS417_19970	0.38	+0.3
4,338,603	-		PS417_19970	0.38	-0.5
4,338,603	-		PS417_19970	0.38	-1.7
4,338,793	-		PS417_19970	0.51	+1.0
4,338,868	+		PS417_19970	0.56	-3.2
4,338,869	-		PS417_19970	0.56	-1.7
4,339,512	+				-0.5
4,339,770	-		PS417_19975	0.60	+1.1
4,339,954	+				-0.7
4,339,955	-				-0.3
4,339,985	-				-0.7
4,340,045	+				-3.3
4,340,232	-				+0.5
4,340,232	-				+0.0
4,340,592	+		PS417_19980	0.77	+1.3
4,340,648	-				+0.2
4,340,648	-				-0.2
4,340,677	-				+0.3
4,340,681	+				-0.9
4,340,682	-				-1.5
4,340,682	-				+0.9
4,340,682	-				+0.0
4,340,682	-				+0.8
4,340,682	-				-0.3