Strain Fitness in Pseudomonas simiae WCS417 around PS417_19915

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,323,853	-		PS417_19910	0.34	+2.0
4,324,195	+		PS417_19910	0.63	+2.5
4,324,256	+		PS417_19910	0.68	-0.9
4,324,256	+				+1.3
4,324,257	-		PS417_19910	0.68	-0.4
4,324,492	+		PS417_19910	0.88	-0.2
4,324,546	+				+0.4
4,324,547	-				+0.8
4,324,547	-				-2.8
4,324,547	-				+1.0
4,324,547	-				+2.3
4,324,547	-				-0.0
4,324,547	-				-0.0
4,324,547	-				-0.9
4,324,548	+				+0.3
4,324,548	+				-2.0
4,324,765	-				+2.7
4,324,836	+		PS417_19915	0.16	-2.2
4,324,837	-		PS417_19915	0.17	-0.2
4,324,984	-		PS417_19915	0.35	-0.5
4,325,001	+		PS417_19915	0.37	-3.6
4,325,002	-		PS417_19915	0.37	-0.9
4,325,007	+		PS417_19915	0.38	+0.3
4,325,064	+		PS417_19915	0.45	-0.2
4,325,250	+		PS417_19915	0.68	-1.9
4,325,250	+		PS417_19915	0.68	-1.0
4,325,250	+		PS417_19915	0.68	-1.5
4,325,250	+		PS417_19915	0.68	-2.1
4,325,250	+		PS417_19915	0.68	-0.6
4,325,250	+		PS417_19915	0.68	+1.7
4,325,251	-		PS417_19915	0.68	-0.2
4,325,251	-		PS417_19915	0.68	+0.9
4,325,322	+		PS417_19915	0.76	-0.1
4,325,322	+		PS417_19915	0.76	-3.1
4,325,322	+		PS417_19915	0.76	-0.1
4,325,322	+				+0.3
4,325,323	-		PS417_19915	0.77	-1.0
4,325,323	-		PS417_19915	0.77	-0.0
4,325,560	+				-2.5
4,325,561	-				+0.4
4,325,565	+				+0.3
4,325,565	+				-1.4
4,325,619	-				-1.1
4,325,619	-				-1.0
4,325,670	-				+0.6
4,325,677	+				+0.1
4,325,677	+				+4.3
4,325,677	+				-0.3
4,325,678	-				-0.4
4,326,038	+		PS417_19920	0.52	+0.2
4,326,232	+		PS417_19920	0.78	-0.2
4,326,232	+		PS417_19920	0.78	+0.3
4,326,232	+		PS417_19920	0.78	+1.6
4,326,233	-		PS417_19920	0.78	+0.9
4,326,233	-		PS417_19920	0.78	-0.7
4,326,233	-		PS417_19920	0.78	+0.5
4,326,233	-		PS417_19920	0.78	-1.2
4,326,234	+		PS417_19920	0.78	-0.2
4,326,319	+		PS417_19920	0.89	-0.8
4,326,321	+		PS417_19920	0.89	-1.7
4,326,321	+		PS417_19920	0.89	-0.8
4,326,322	-		PS417_19920	0.90	-2.1
4,326,322	-		PS417_19920	0.90	-0.3
4,326,322	-		PS417_19920	0.90	-1.0
4,326,446	-				-2.1
4,326,484	+				-1.2
4,326,485	-				+0.5