Strain Fitness in Pseudomonas simiae WCS417 around PS417_19900

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,321,241	+		PS417_19895	0.55	+1.1
4,321,241	+		PS417_19895	0.55	-0.2
4,321,241	+		PS417_19895	0.55	-2.1
4,321,241	+		PS417_19895	0.55	+0.6
4,321,242	-		PS417_19895	0.55	-1.2
4,321,242	-		PS417_19895	0.55	+0.2
4,321,248	-		PS417_19895	0.56	-0.8
4,321,248	-		PS417_19895	0.56	-0.7
4,321,359	+		PS417_19895	0.63	+0.3
4,321,359	+		PS417_19895	0.63	-0.8
4,321,359	+		PS417_19895	0.63	+0.9
4,321,360	-		PS417_19895	0.63	+0.7
4,321,818	+				-1.3
4,321,819	-				-2.5
4,321,819	-				-0.1
4,321,872	+				-0.2
4,322,151	-				+1.7
4,322,151	-				+1.4
4,322,168	+				-0.3
4,322,168	+				+1.1
4,322,168	+				+0.7
4,322,168	+				+2.6
4,322,168	+				+0.1
4,322,169	-				+0.5
4,322,169	-				+1.0
4,322,216	-				+0.1
4,322,216	-				+0.6
4,322,216	-				+0.0
4,322,216	-				+0.7
4,322,247	+				+0.2
4,322,377	-		PS417_19900	0.22	+0.6
4,322,536	+		PS417_19900	0.42	+0.6
4,322,623	+		PS417_19900	0.53	+0.5
4,322,666	-		PS417_19900	0.59	+0.2
4,322,735	-		PS417_19900	0.68	-2.1
4,322,773	+		PS417_19900	0.72	+0.1
4,322,774	-		PS417_19900	0.72	+0.3
4,322,774	-		PS417_19900	0.72	+3.0
4,322,774	-		PS417_19900	0.72	+0.3
4,322,774	-		PS417_19900	0.72	+1.2
4,322,996	+				+0.9
4,322,997	-				+0.4
4,322,997	-				+0.1
4,323,444	-				-0.7
4,323,553	+				-0.8
4,323,553	+				+0.4
4,323,554	-				-1.5
4,323,556	-				-0.0
4,323,640	+		PS417_19910	0.16	-1.4
4,323,641	-		PS417_19910	0.16	-2.8
4,323,641	-		PS417_19910	0.16	+0.2
4,323,853	-		PS417_19910	0.34	+2.0