Strain Fitness in Pseudomonas simiae WCS417 around PS417_19615

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,265,025	-				-0.3
4,265,115	-				+0.9
4,265,211	-		PS417_19610	0.12	-2.2
4,265,863	+				-0.3
4,265,897	+				-0.7
4,265,898	-				-1.0
4,265,954	+				-1.0
4,266,107	+		PS417_19615	0.16	-2.3
4,266,107	+		PS417_19615	0.16	-1.3
4,266,107	+				+3.6
4,266,107	+		PS417_19615	0.16	-1.6
4,266,107	+		PS417_19615	0.16	-1.6
4,266,108	-		PS417_19615	0.16	-0.7
4,266,108	-		PS417_19615	0.16	-2.1
4,266,108	-		PS417_19615	0.16	-3.1
4,266,500	+		PS417_19615	0.58	-0.3
4,266,500	+		PS417_19615	0.58	+0.5
4,266,501	-		PS417_19615	0.58	-3.1
4,266,606	-		PS417_19615	0.69	+0.6
4,266,619	-		PS417_19615	0.71	-0.3
4,266,871	+				-0.3
4,266,976	-				-1.0
4,266,976	-				-0.7
4,266,986	+				-0.3
4,266,988	-				-0.7
4,267,020	+				-0.7
4,267,094	+				+0.8
4,267,094	+				+0.3
4,267,094	+				-0.7
4,267,140	+				-4.0
4,267,144	+				-4.0
4,267,144	+				-2.3
4,267,144	+				-1.9
4,267,144	+				-3.5
4,267,144	+				-1.3
4,267,145	-				-3.1
4,267,233	-				+0.3
4,267,311	+				-2.9
4,267,312	-				-4.8
4,267,360	+				+0.3
4,267,377	+				-0.1
4,267,377	+				+0.8
4,267,378	-				-3.7
4,267,416	+				+1.9
4,267,416	+				-0.3
4,267,416	+				+2.0
4,267,416	+				+0.9
4,267,417	-				-2.6
4,267,417	-				-0.7
4,267,433	+				-1.3
4,267,433	+				+0.5
4,267,653	+		PS417_19620	0.49	+1.3
4,267,654	-		PS417_19620	0.49	-2.4
4,267,812	-		PS417_19620	0.84	-2.9
4,267,848	+				+1.0
4,267,889	+				+2.3
4,267,890	-				-3.1
4,267,890	-				-2.9