Strain Fitness in Pseudomonas simiae WCS417 around PS417_19590

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,260,235	+		PS417_19585	0.17	-0.4
4,260,235	+		PS417_19585	0.17	-1.5
4,260,236	-		PS417_19585	0.17	-1.3
4,260,236	-		PS417_19585	0.17	+1.0
4,260,236	-		PS417_19585	0.17	+2.2
4,260,241	+		PS417_19585	0.17	+0.5
4,260,242	-		PS417_19585	0.17	-0.7
4,260,308	+		PS417_19585	0.23	-0.2
4,260,309	-		PS417_19585	0.23	+0.9
4,260,485	-		PS417_19585	0.38	-1.8
4,260,485	-		PS417_19585	0.38	-0.3
4,260,485	-		PS417_19585	0.38	+0.5
4,260,790	-		PS417_19585	0.65	-0.7
4,260,958	+		PS417_19585	0.79	-0.5
4,260,959	-		PS417_19585	0.79	-1.7
4,260,959	-		PS417_19585	0.79	+0.2
4,261,071	+		PS417_19585	0.89	-2.8
4,261,072	-		PS417_19585	0.89	+1.9
4,261,072	-		PS417_19585	0.89	-2.5
4,261,414	+		PS417_19590	0.28	-1.3
4,261,414	+		PS417_19590	0.28	-0.9
4,261,490	-		PS417_19590	0.38	-2.0
4,261,595	-		PS417_19590	0.52	-0.9
4,261,952	+				-3.6
4,262,069	+				-1.1
4,262,176	-				-0.3
4,262,206	+				-0.6
4,262,206	+				-0.4
4,262,259	+				-3.1
4,262,259	+				-0.2
4,262,260	-				-0.4
4,262,260	-				-3.4
4,262,883	+		PS417_19595	0.43	-1.5
4,262,883	+		PS417_19595	0.43	-0.5
4,262,883	+		PS417_19595	0.43	-0.5
4,262,884	-		PS417_19595	0.43	-0.3
4,262,934	+		PS417_19595	0.46	-1.3