Strain Fitness in Pseudomonas simiae WCS417 around PS417_19535

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,236,089	+		PS417_19535	0.37	+0.2
4,236,089	+		PS417_19535	0.37	-0.8
4,236,090	-		PS417_19535	0.37	-1.3
4,236,090	-		PS417_19535	0.37	+1.3
4,236,090	-		PS417_19535	0.37	+0.3
4,236,485	+		PS417_19535	0.89	-1.4
4,236,485	+		PS417_19535	0.89	-1.0
4,236,567	-				+1.7
4,236,581	+				-0.3
4,236,582	-				-1.3
4,236,784	+				+0.2
4,236,787	+				+1.1
4,236,787	+				+1.6
4,236,787	+				+0.2
4,236,788	-				+0.5
4,236,808	-				-0.3
4,236,878	+				+2.5
4,236,878	+				-0.3
4,236,948	+		PS417_19540	0.11	-0.9
4,236,949	-		PS417_19540	0.11	-0.1
4,236,949	-		PS417_19540	0.11	-2.4
4,236,949	-		PS417_19540	0.11	+0.2
4,236,955	-		PS417_19540	0.12	+0.5
4,236,955	-		PS417_19540	0.12	+0.3
4,236,957	-		PS417_19540	0.12	-0.6
4,237,016	-		PS417_19540	0.14	+1.7
4,237,087	-				+0.3
4,237,162	-		PS417_19540	0.19	-1.7
4,237,211	+		PS417_19540	0.21	-0.4
4,237,212	-		PS417_19540	0.21	-0.5
4,237,291	+		PS417_19540	0.24	-0.2
4,237,527	+		PS417_19540	0.33	-2.6
4,237,528	-		PS417_19540	0.33	+0.1
4,237,548	-		PS417_19540	0.33	+1.3