Strain Fitness in Pseudomonas simiae WCS417 around PS417_18795

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,073,749	-				+1.4
4,073,749	-				+0.0
4,073,874	+				+0.8
4,073,874	+				+0.3
4,073,875	-				+1.9
4,073,940	-		PS417_18790	0.20	+0.0
4,073,940	-		PS417_18790	0.20	-0.5
4,073,966	+		PS417_18790	0.24	-0.9
4,073,966	+		PS417_18790	0.24	+0.4
4,073,966	+		PS417_18790	0.24	+0.3
4,073,967	-		PS417_18790	0.24	-1.6
4,073,967	-		PS417_18790	0.24	-1.4
4,073,967	-		PS417_18790	0.24	+0.4
4,074,301	-		PS417_18790	0.79	-0.5
4,074,401	+				-0.2
4,074,401	+				+0.9
4,074,402	-				-2.7
4,074,402	-				-0.3
4,074,402	-				+1.4
4,074,526	-				-1.4
4,074,848	+		PS417_18795	0.36	-0.6
4,074,849	-		PS417_18795	0.36	-1.2
4,074,849	-		PS417_18795	0.36	-1.0
4,074,849	-		PS417_18795	0.36	-0.3
4,074,849	-		PS417_18795	0.36	-0.4
4,074,849	-		PS417_18795	0.36	-1.2
4,075,170	-		PS417_18795	0.73	-0.4
4,075,170	-		PS417_18795	0.73	-1.0
4,075,235	-		PS417_18795	0.81	-0.6
4,075,321	-				-0.3
4,075,372	+				+0.4
4,075,422	-				-0.8
4,075,721	+		PS417_18800	0.73	-0.8
4,075,722	-		PS417_18800	0.73	+0.4
4,076,050	+		PS417_18805	0.13	+0.0
4,076,051	-		PS417_18805	0.13	+0.2
4,076,171	-		PS417_18805	0.23	-1.0
4,076,209	+		PS417_18805	0.26	-0.5
4,076,212	+		PS417_18805	0.26	+0.2
4,076,212	+		PS417_18805	0.26	+0.4
4,076,212	+		PS417_18805	0.26	-2.9
4,076,213	-		PS417_18805	0.26	+0.9
4,076,315	-		PS417_18805	0.34	-0.7