Strain Fitness in Pseudomonas simiae WCS417 around PS417_18775

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,071,131	+				+0.5
4,071,437	+		PS417_18770	0.36	-0.8
4,071,537	+		PS417_18770	0.46	+0.2
4,071,581	-		PS417_18770	0.51	-2.6
4,071,701	+		PS417_18770	0.63	+0.8
4,071,701	+		PS417_18770	0.63	+1.7
4,071,748	+				+0.4
4,071,770	+		PS417_18770	0.70	-0.2
4,071,771	-		PS417_18770	0.70	+0.7
4,071,797	+		PS417_18770	0.73	-1.4
4,071,869	+		PS417_18770	0.80	-0.7
4,071,870	-		PS417_18770	0.80	-0.7
4,071,878	-		PS417_18770	0.81	-0.4
4,071,926	+		PS417_18770	0.86	+1.8
4,071,946	-		PS417_18770	0.88	+3.4
4,071,948	-		PS417_18770	0.88	-1.4
4,072,070	+				-0.1
4,072,108	+				+0.9
4,072,109	-				-0.2
4,072,133	-				+2.4
4,072,514	+		PS417_18775	0.41	+2.3
4,072,528	+		PS417_18775	0.42	+0.4
4,072,528	+		PS417_18775	0.42	+1.0
4,072,703	-		PS417_18775	0.59	-0.4
4,072,793	+		PS417_18775	0.68	+0.2
4,072,856	-		PS417_18775	0.74	-0.6
4,072,856	-		PS417_18775	0.74	-2.1
4,073,258	-		PS417_18780	0.25	-1.4
4,073,318	-		PS417_18780	0.37	-0.4
4,073,749	-				+1.4
4,073,749	-				+0.0
4,073,874	+				+0.8
4,073,874	+				+0.3
4,073,875	-				+1.9
4,073,940	-		PS417_18790	0.20	+0.0
4,073,940	-		PS417_18790	0.20	-0.5
4,073,966	+		PS417_18790	0.24	-0.9
4,073,966	+		PS417_18790	0.24	+0.4
4,073,966	+		PS417_18790	0.24	+0.3
4,073,967	-		PS417_18790	0.24	-1.6
4,073,967	-		PS417_18790	0.24	-1.4
4,073,967	-		PS417_18790	0.24	+0.4