Strain Fitness in Pseudomonas simiae WCS417 around PS417_18615

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,044,403	-		PS417_18610	0.74	-0.2
4,044,428	+		PS417_18610	0.75	+0.6
4,044,984	+				+0.8
4,044,985	-				+1.4
4,045,189	-				-0.5
4,045,189	-				-1.7
4,045,435	-				-0.0
4,045,437	-				+0.7
4,045,740	+		PS417_18615	0.25	-1.2
4,045,784	-		PS417_18615	0.27	-0.5
4,045,801	-		PS417_18615	0.28	+0.4
4,045,801	-		PS417_18615	0.28	+0.9
4,045,981	+		PS417_18615	0.38	+0.8
4,046,023	+		PS417_18615	0.40	-1.3
4,046,042	+		PS417_18615	0.41	+2.0
4,046,042	+		PS417_18615	0.41	+0.8
4,046,080	-		PS417_18615	0.43	+1.0
4,046,552	-		PS417_18615	0.67	+0.8
4,046,552	-		PS417_18615	0.67	-1.0
4,046,552	-		PS417_18615	0.67	-0.2
4,046,552	-		PS417_18615	0.67	-0.9
4,046,553	+		PS417_18615	0.67	-0.6
4,046,553	+		PS417_18615	0.67	-2.8
4,046,553	+		PS417_18615	0.67	+1.2
4,046,553	+				+0.4
4,046,553	+		PS417_18615	0.67	-1.0
4,046,553	+		PS417_18615	0.67	+0.1
4,046,553	+		PS417_18615	0.67	-0.6
4,046,553	+		PS417_18615	0.67	+0.6
4,046,554	-		PS417_18615	0.67	-0.1
4,046,554	-		PS417_18615	0.67	+1.5
4,046,554	-		PS417_18615	0.67	+0.0
4,046,554	-		PS417_18615	0.67	-1.5
4,046,554	-		PS417_18615	0.67	+0.5
4,046,554	-				-1.6
4,046,554	-				+1.4
4,046,554	-				+1.4
4,046,554	-		PS417_18615	0.67	+1.4
4,046,557	+		PS417_18615	0.68	-0.5
4,046,557	+		PS417_18615	0.68	+0.2
4,046,557	+		PS417_18615	0.68	-0.5
4,046,557	+		PS417_18615	0.68	+0.2
4,046,557	+		PS417_18615	0.68	+1.1
4,046,557	+		PS417_18615	0.68	+0.4
4,046,558	-		PS417_18615	0.68	-0.5
4,046,558	-		PS417_18615	0.68	+0.9
4,046,558	-		PS417_18615	0.68	-0.1
4,046,558	-		PS417_18615	0.68	-1.0
4,046,558	-		PS417_18615	0.68	-0.4
4,046,558	-		PS417_18615	0.68	+0.3
4,046,558	-				-0.2
4,046,558	-		PS417_18615	0.68	-0.5
4,046,559	+		PS417_18615	0.68	+0.7
4,046,559	+		PS417_18615	0.68	+2.1
4,046,559	+		PS417_18615	0.68	-0.6
4,046,559	+		PS417_18615	0.68	-1.2
4,046,560	-		PS417_18615	0.68	-0.1
4,046,560	-		PS417_18615	0.68	-1.7
4,046,560	-		PS417_18615	0.68	-0.7
4,046,560	-		PS417_18615	0.68	-0.1
4,046,560	-		PS417_18615	0.68	+0.8
4,046,560	-		PS417_18615	0.68	+0.1
4,046,611	-		PS417_18615	0.70	+0.1
4,046,634	+		PS417_18615	0.72	-0.3
4,046,634	+		PS417_18615	0.72	+1.4
4,046,634	+		PS417_18615	0.72	-0.8
4,046,634	+		PS417_18615	0.72	-0.5
4,046,634	+		PS417_18615	0.72	+0.2
4,046,634	+		PS417_18615	0.72	+2.5
4,046,635	-		PS417_18615	0.72	-1.2
4,046,635	-		PS417_18615	0.72	+0.3
4,046,635	-		PS417_18615	0.72	+0.4
4,046,635	-		PS417_18615	0.72	-2.3
4,046,668	+		PS417_18615	0.73	-1.8
4,046,822	-		PS417_18615	0.81	-0.1
4,046,932	-		PS417_18615	0.87	-0.7
4,046,932	-				-0.2
4,046,976	-		PS417_18615	0.89	-0.8
4,046,976	-		PS417_18615	0.89	-1.6
4,047,146	-				-0.4
4,047,175	+				+0.6
4,047,203	+				-0.1
4,047,204	-				-1.0
4,047,300	+		PS417_18620	0.10	+0.6
4,047,301	-				+1.4
4,047,588	-		PS417_18620	0.66	-0.8
4,047,705	+		PS417_18620	0.88	-0.8
4,047,705	+		PS417_18620	0.88	+0.8
4,047,705	+		PS417_18620	0.88	-1.0
4,047,706	-		PS417_18620	0.88	-0.9
4,047,706	-		PS417_18620	0.88	-1.2
4,047,709	+		PS417_18620	0.89	+1.0
4,047,806	-				+1.4
4,047,850	+				-1.0
4,047,851	-				+1.8
4,047,851	-				+2.9
4,047,897	-				+1.9
4,047,917	+				-0.9
4,047,917	+				+1.1
4,047,917	+				+1.4
4,048,036	+				-3.4
4,048,048	+				-0.3
4,048,049	-				-0.1
4,048,087	+				-0.2
4,048,160	-				+1.2
4,048,170	-				+0.4