Strain Fitness in Pseudomonas simiae WCS417 around PS417_18610

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,041,134	-		PS417_18605	0.14	-1.8
4,041,334	+				+0.4
4,041,334	+		PS417_18605	0.37	+1.1
4,041,338	+		PS417_18605	0.37	-0.6
4,041,339	-				-0.2
4,041,339	-		PS417_18605	0.37	-0.9
4,041,339	-		PS417_18605	0.37	-0.6
4,041,355	-		PS417_18605	0.39	-0.3
4,041,599	+		PS417_18605	0.67	+1.2
4,041,672	-		PS417_18605	0.75	-0.2
4,041,675	+		PS417_18605	0.75	+1.2
4,041,676	-		PS417_18605	0.75	+0.3
4,041,686	+		PS417_18605	0.76	+0.4
4,041,761	+		PS417_18605	0.85	+1.2
4,041,796	+		PS417_18605	0.89	+0.6
4,041,802	-		PS417_18605	0.89	+0.9
4,041,802	-		PS417_18605	0.89	-1.5
4,041,961	+				-0.1
4,041,962	-				+0.1
4,042,680	-		PS417_18610	0.22	+0.1
4,042,680	-		PS417_18610	0.22	-2.3
4,042,882	-		PS417_18610	0.28	+0.3
4,043,031	+		PS417_18610	0.32	-0.7
4,043,031	+		PS417_18610	0.32	-0.7
4,043,032	-		PS417_18610	0.32	-1.3
4,043,032	-				+0.9
4,043,032	-		PS417_18610	0.32	+0.3
4,043,100	+		PS417_18610	0.34	-0.8
4,043,288	+		PS417_18610	0.40	-0.2
4,043,504	+		PS417_18610	0.47	-0.4
4,043,504	+				+0.4
4,043,504	+		PS417_18610	0.47	-0.4
4,043,504	+		PS417_18610	0.47	+1.1
4,043,505	-		PS417_18610	0.47	-0.1
4,043,505	-		PS417_18610	0.47	-1.3
4,043,790	+		PS417_18610	0.55	-1.9
4,043,791	-		PS417_18610	0.55	-0.5
4,043,827	+		PS417_18610	0.57	-0.0
4,043,827	+		PS417_18610	0.57	+0.3
4,044,030	-		PS417_18610	0.63	+0.8
4,044,403	-		PS417_18610	0.74	-0.2
4,044,428	+		PS417_18610	0.75	+0.6
4,044,984	+				+0.8
4,044,985	-				+1.4
4,045,189	-				-0.5
4,045,189	-				-1.7
4,045,435	-				-0.0
4,045,437	-				+0.7
4,045,740	+		PS417_18615	0.25	-1.2
4,045,784	-		PS417_18615	0.27	-0.5
4,045,801	-		PS417_18615	0.28	+0.4
4,045,801	-		PS417_18615	0.28	+0.9
4,045,981	+		PS417_18615	0.38	+0.8
4,046,023	+		PS417_18615	0.40	-1.3
4,046,042	+		PS417_18615	0.41	+2.0
4,046,042	+		PS417_18615	0.41	+0.8
4,046,080	-		PS417_18615	0.43	+1.0