Strain Fitness in Pseudomonas simiae WCS417 around PS417_18465

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,013,931	-				+3.1
4,014,054	+		PS417_18455	0.55	-1.5
4,014,055	-		PS417_18455	0.55	+1.8
4,014,090	+		PS417_18455	0.70	+0.1
4,014,220	+				-0.1
4,014,249	+				+3.0
4,014,279	+		PS417_18460	0.11	-0.8
4,014,465	-		PS417_18460	0.38	+0.7
4,014,660	-		PS417_18460	0.67	+0.7
4,014,894	-				-0.4
4,015,022	+		PS417_18465	0.10	+0.4
4,015,374	-		PS417_18465	0.36	-1.1
4,015,389	-		PS417_18465	0.37	-2.7
4,015,389	-				-0.2
4,015,389	-		PS417_18465	0.37	-1.3
4,015,716	-		PS417_18465	0.60	-0.5
4,015,991	+		PS417_18465	0.80	-1.7
4,015,991	+		PS417_18465	0.80	-0.3
4,016,094	+		PS417_18465	0.87	-0.3
4,016,095	-		PS417_18465	0.87	-0.7
4,016,095	-		PS417_18465	0.87	-0.3
4,016,295	+				+0.9
4,016,317	+				-0.6
4,016,409	+				-0.5
4,016,409	+				-0.6
4,016,416	-				+0.3
4,016,416	-				-0.8
4,016,549	+		PS417_18470	0.65	+0.2
4,016,549	+		PS417_18470	0.65	-0.9
4,016,550	-		PS417_18470	0.66	+1.9
4,016,581	-		PS417_18470	0.80	-2.0
4,016,683	+				-1.6
4,016,683	+				+0.6
4,016,684	-				-1.0
4,016,728	+		PS417_18475	0.13	-1.3
4,016,729	-		PS417_18475	0.14	-1.6
4,016,729	-		PS417_18475	0.14	+0.8
4,016,729	-		PS417_18475	0.14	-0.5
4,017,272	+				+0.3