Strain Fitness in Pseudomonas simiae WCS417 around PS417_18245

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,974,241	-		PS417_18235	0.81	+0.4
3,974,457	+				+0.1
3,974,477	+		PS417_18240	0.12	-1.1
3,974,477	+		PS417_18240	0.12	+1.1
3,974,507	-		PS417_18240	0.17	-0.9
3,974,615	-		PS417_18240	0.33	-0.1
3,974,623	+		PS417_18240	0.34	+0.9
3,974,623	+		PS417_18240	0.34	-0.5
3,974,624	-		PS417_18240	0.35	+0.6
3,974,624	-		PS417_18240	0.35	-1.9
3,974,800	+		PS417_18240	0.61	-0.0
3,974,801	-		PS417_18240	0.61	-0.1
3,974,801	-		PS417_18240	0.61	+0.1
3,974,830	+		PS417_18240	0.66	-2.6
3,974,831	-		PS417_18240	0.66	+0.9
3,974,831	-		PS417_18240	0.66	+1.2
3,974,935	+		PS417_18240	0.81	-1.0
3,974,935	+		PS417_18240	0.81	+1.2
3,974,936	-		PS417_18240	0.82	+1.3
3,974,954	+		PS417_18240	0.84	-1.4
3,975,016	+				+1.1
3,975,183	-		PS417_18245	0.10	-3.0
3,975,562	+		PS417_18245	0.40	-0.5
3,975,591	+		PS417_18245	0.43	-1.8
3,975,592	-		PS417_18245	0.43	+0.1
3,975,831	+		PS417_18245	0.62	-0.2
3,975,831	+		PS417_18245	0.62	-0.4
3,975,831	+		PS417_18245	0.62	-0.5
3,975,832	-		PS417_18245	0.62	-0.2
3,976,014	+		PS417_18245	0.76	-1.2
3,976,014	+		PS417_18245	0.76	-2.3
3,976,014	+		PS417_18245	0.76	-0.8
3,976,014	+		PS417_18245	0.76	-1.3
3,976,160	+		PS417_18245	0.88	+0.2
3,976,160	+		PS417_18245	0.88	-0.7
3,976,160	+		PS417_18245	0.88	-0.9
3,976,160	+		PS417_18245	0.88	-1.4
3,976,161	-		PS417_18245	0.88	-0.6
3,976,161	-		PS417_18245	0.88	-1.4
3,976,320	+				-0.7
3,976,739	-		PS417_18250	0.31	-0.2
3,976,903	+		PS417_18250	0.44	-3.2
3,976,904	-		PS417_18250	0.44	-1.0
3,977,259	-		PS417_18250	0.72	+0.3
3,977,272	-		PS417_18250	0.73	-1.0