Strain Fitness in Pseudomonas simiae WCS417 around PS417_18225

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,970,246	+		PS417_18220	0.26	+0.1
3,970,247	-		PS417_18220	0.26	+0.9
3,970,314	+		PS417_18220	0.32	-0.6
3,970,315	-		PS417_18220	0.32	-0.6
3,970,361	+		PS417_18220	0.37	+0.1
3,970,409	+		PS417_18220	0.41	-0.0
3,970,409	+		PS417_18220	0.41	-0.9
3,970,541	-		PS417_18220	0.54	+0.3
3,970,749	-		PS417_18220	0.73	+1.2
3,970,772	-		PS417_18220	0.75	-0.2
3,970,806	-		PS417_18220	0.79	+0.2
3,970,965	+				-0.8
3,970,974	-				+2.2
3,970,974	-				+0.4
3,970,974	-				+1.9
3,971,061	+				-0.3
3,971,062	-				+0.4
3,971,183	+				+1.6
3,971,237	-		PS417_18225	0.14	-0.5
3,971,266	+				-1.2
3,971,524	+		PS417_18225	0.47	+0.3
3,971,524	+				+1.8
3,971,524	+		PS417_18225	0.47	-0.6
3,971,524	+		PS417_18225	0.47	+2.2
3,971,524	+		PS417_18225	0.47	+0.6
3,971,524	+		PS417_18225	0.47	-0.1
3,971,525	-		PS417_18225	0.47	+0.6
3,971,525	-		PS417_18225	0.47	+0.0
3,971,529	-		PS417_18225	0.48	+2.4
3,971,605	+		PS417_18225	0.56	+0.7
3,971,605	+		PS417_18225	0.56	-0.4
3,971,743	+		PS417_18225	0.72	+1.8
3,971,758	-		PS417_18225	0.74	-1.5
3,971,842	-		PS417_18225	0.84	+0.4
3,972,271	-				+2.3
3,972,333	-		PS417_18230	0.11	-1.0
3,972,394	+				+1.6
3,972,788	-				+1.9
3,972,801	+		PS417_18230	0.42	-2.0
3,972,801	+		PS417_18230	0.42	-0.2
3,972,820	+		PS417_18230	0.43	-1.2
3,972,820	+		PS417_18230	0.43	-1.0
3,972,964	+		PS417_18230	0.52	-0.9
3,972,964	+		PS417_18230	0.52	-0.7
3,972,965	-		PS417_18230	0.52	+1.3
3,972,965	-		PS417_18230	0.52	-1.0