Strain Fitness in Pseudomonas simiae WCS417 around PS417_17860

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,898,519	+		PS417_17855	0.27	-0.3
3,898,520	-		PS417_17855	0.27	-1.0
3,898,520	-		PS417_17855	0.27	+0.0
3,898,940	-				+1.7
3,899,045	+		PS417_17855	0.67	+0.7
3,899,051	-		PS417_17855	0.67	-1.7
3,899,398	+				-1.4
3,899,402	+				+0.4
3,899,416	-				-1.4
3,899,462	+				-0.8
3,899,724	+		PS417_17860	0.29	+0.2
3,899,959	+		PS417_17860	0.59	+0.9
3,900,175	+		PS417_17860	0.86	+1.1
3,900,207	-		PS417_17860	0.90	+0.7
3,900,236	+				+0.3
3,900,253	-				+1.3
3,900,391	+		PS417_17865	0.10	+2.0
3,900,485	+		PS417_17865	0.22	-0.0
3,900,485	+		PS417_17865	0.22	-0.5
3,900,486	-		PS417_17865	0.22	+0.1
3,900,716	-		PS417_17865	0.51	+0.9
3,900,893	+		PS417_17865	0.73	-1.5
3,900,979	+		PS417_17865	0.84	-0.5
3,901,116	-				+1.6
3,901,116	-				-1.2
3,901,116	-				+1.3